Updated on 2023/10/23

写真a

 
ONUMA Takeshi
 
Organization
Research Field in Science, Science and Engineering Area Graduate School of Science and Engineering (Science) Department of Science Biorogy Program Associate Professor
Title
Associate Professor
External link

Degree

  • 博士 (理学) ( 2005.9   北海道大学 )

Research Interests

  • gene screening

  • DNAi

  • 3D morphogenesis

  • tadpole body

  • appendicularian

  • house

  • live imaging

  • Left-right asymmetry

  • chordate

  • Developmental Biology

Research Areas

  • Life Science / Developmental biology

  • Life Science / Cell biology

Education

  • Hokkaido University   Graduate School of Science   Division of Biological Science

    2003.4 - 2005.9

  • Hokkaido University   Graduate School of Science   Division of Biological Science

    2001.4 - 2003.3

  • Hokkaido University

    1997.4 - 2001.3

Research History

  • Faculty of Science, Kagoshima University   Associate Professor

    2021.4

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    Country:Japan

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  • Kagoshima University   Associate Professor

    2021.4

  • Osaka University   Department of Biological Science, Gradulate School of Science   Assistant Professor

    2012.4 - 2021.3

  • Division of Biological Sciences, Graduate School of Sciences, Osaka Univeristy   Assistant Professor

    2012.4 - 2021.3

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    Country:Japan

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  • University of Michigan   Department of Molecular, Cellular and Developmental Biology   Researcher

    2011.4 - 2012.3

  • Molecular, Cellular and Developmental Biology, University of Michigan

    2011.4 - 2012.3

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    Country:United States

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  • University of Michigan   Department of Molecular, Cellular and Developmental Biology   Researcher

    2011.4 - 2012.3

  • JSPS Oversea Research Fellow (University of Michigan)

    2009.4 - 2011.3

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  • University of Michigan   Department of Molecular, Cellular and Developmental Biology   Research associate of the Japan Society for the Promotion of Science

    2009.4 - 2011.3

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    Country:United States

  • Kyushu University   Research associate of the Japan Society for the Promotion of Science

    2006.4 - 2009.3

  • JSPS Research Fellow (Kyushu University)

    2006.4 - 2009.3

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  • Hokkaido University   Research associate of the Japan Society for the Promotion of Science

    2005.10 - 2006.3

  • JSPS Research Fellow (Hokkaido Univeristy)

    2005.10 - 2006.3

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  • Hokkaido University   Special researcher of the Japan Society for the Promotion of Science

    2004.3 - 2005.9

  • JSPS Research Fellow (Hokkaido University)

    2004.3 - 2005.9

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  • Hokkaido University   Graduate student(doctorate program)

    2003.4 - 2004.3

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Professional Memberships

  • 日本発生生物学会

    2012.4

  • 日本動物学会

    2001.4

  • 日本比較内分泌学会

    2000.4

Committee Memberships

  •   日本動物学会 九州支部 県代表委員  

    2022.4   

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    Committee type:Academic society

 

Papers

  • Nicholas Treen, Shohei Konishi, Hiroki Nishida, Takeshi A Onuma, Yasunori Sasakura .  Zic-r.b controls cell numbers in Ciona embryos by activating CDKN1B. .  Developmental biology498   26 - 34   2023.6Zic-r.b controls cell numbers in Ciona embryos by activating CDKN1B.International journal

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    The control of cell numbers and the establishment of cell types are two processes that are essential in early embryonic development. We have a reasonable understanding of how these processes occur individually, but we have considerably less sophisticated understanding of how these processes are linked. Tunicates have fixed cell lineages with predictable cell cycles, making them well suited to investigate these processes. In the ascidian Ciona, we show that the transcription factor Zic-r.b, known to be involved in establishing several cell types in early development also activates the expression of the cell cycle inhibitor CDKN1B. Zic-r.b is a major missing component of the cell division clock establishing specific cell numbers. We also show that a larvacean homolog of Zic-r.b is expressed one cell cycle earlier than its Ciona counterpart. The early expression in larvaceans may explain why they have half as many notochord cells as ascidians and may illustrate a general mechanism to evolve changes in morphology.

    DOI: 10.1016/j.ydbio.2023.03.005

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  • Misako Konishi, Kanae Kishi, Ryo Morita, Atsuko Yamada, Takeshi A Onuma, Hiroki Nishida .  Formation of the brain by stem cell divisions of large neuroblasts in Oikopleura dioica, a simple chordate. .  Development genes and evolution233 ( 1 ) 35 - 47   2023.6Formation of the brain by stem cell divisions of large neuroblasts in Oikopleura dioica, a simple chordate.International journal

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    Stem cell division contributes to the generation of various cell types during animal development, especially a diverse pool of neural cells in the nervous system. One example is reiterated unequal stem cell divisions, in which a large stem cell undergoes a series of oriented unequal divisions to produce a chain of small daughter cells that differentiate. We show that reiterated unequal stem cell divisions are involved in the formation of the brain in simple chordate appendicularians (larvaceans). Two large neuroblasts in the anterior and middle of the brain-forming region of hatched larvae were observed. They produced at least 30 neural cells out of 96 total brain cells before completion of brain formation at 10 hours after fertilization by reiterated unequal stem cell divisions. The daughter cells of the anterior neuroblast were postmitotic, and the number was at least 19. The neuroblast produced small daughter neural cells posteriorly every 20 min. The neural cells first moved toward the dorsal side, turned in the anterior direction, aligned in a single line according to their birth order, and showed collective movement to accumulate in the anterior part of the brain. The anterior neuroblast originated from the right-anterior blastomeres of the eight-cell embryos and the right a222 blastomere of the 64-cell embryo. The posterior neuroblast also showed reiterated unequal stem cell divisions, and generated at least 11 neural cells. Sequential unequal stem cell divisions without stem cell growth have been observed in protostomes, such as insects and annelids. The results provide the first examples of this kind of stem cell division during brain formation in non-vertebrate deuterostomes.

    DOI: 10.1007/s00427-023-00704-y

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  • Aki Masunaga, Michael J. Mansfield, Yongkai Tan, Andrew W. Liu, Aleksandra Bliznina, Paolo Barzaghi, Tamara L. Hodgetts, Alfonso Ferrandez-Roldan, Cristian Canestro, Takeshi A. Onuma, Charles Plessy, Nicholas M. Luscombe .  The cosmopolitan appendicularian Oikopleura dioica reveals hidden genetic diversity around the globe .  MARINE BIOLOGY169 ( 12 )   2022.12The cosmopolitan appendicularian Oikopleura dioica reveals hidden genetic diversity around the globe

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:SPRINGER HEIDELBERG  

    Appendicularian tunicates are some of the most abundant mesozooplankton organisms with key roles in marine trophic webs and global carbon flux. Like most appendicularians with cosmopolitan distributions, Oikopleura dioica Fol, 1872 is considered a single species worldwide based on morphological features that distinguish them from other appendicularians. Despite their abundance, however, there are still only similar to 70 described appendicularian species, compared to over 2800 ascidian tunicates. Here we perform a molecular phylogenetic, morphological, and reproductive assessment of O. dioica specimens collected from the Ryukyu Archipelago, mainland Japan, and Europe. The specimens are morphologically very similar, with only detailed examination of the oikoplastic epithelium and quantitative measurements revealing minor distinguishing characteristics. Phylogenetic analyses of the ribosomal gene loci and mitochondrial cytochrome oxidase I (COI) gene strongly indicate that they form three separate genetic clades despite their morphological similarities. Finally, in vitro crosses between the Ryukyu and mainland Japanese specimens show total prezygotic reproductive isolation. Our results reveal that the current taxonomic O. dioica classification likely hides multiple cryptic species, highlighting the genetic diversity and complexity of their population structures. Cryptic organisms are often hidden under a single species name because their morphological similarities make them difficult to distinguish and their correct identification is fundamental to understanding Earth's biodiversity. O. dioica is an attractive model to understand how morphological conservation can be maintained despite pronounced genetic divergence.

    DOI: 10.1007/s00227-022-04145-5

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  • Masayuki Yamagishi, Taoruo Huang, Akiko Hozumi, Takeshi A Onuma, Yasunori Sasakura, Michio Ogasawara .  Differentiation of endostyle cells by Nkx2-1 and FoxE in the ascidian Ciona intestinalis type A: insights into shared gene regulation in glandular- and thyroid-equivalent elements of the chordate endostyle. .  Cell and tissue research390 ( 2 ) 189 - 205   2022.11Differentiation of endostyle cells by Nkx2-1 and FoxE in the ascidian Ciona intestinalis type A: insights into shared gene regulation in glandular- and thyroid-equivalent elements of the chordate endostyle.International journal

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    Due to similarities in iodine concentrations and peroxidase activities, the thyroid in vertebrates is considered to originate from the endostyle of invertebrate chordates even though it is a glandular (mucus-producing) organ for aquatic suspension feeding. Among chordates with an endostyle, urochordates are useful evolutionary research models for the study of vertebrate traits. The ascidian Ciona intestinalis forms an endostyle with specific components of glandular- and thyroid-related elements, and molecular markers have been identified for these components. Since we previously examined a simple endostyle in the larvacean Oikopleura dioica, the expression of the thyroid-related transcription factor genes, Ciona Nkx2-1 and FoxE, was perturbed by TALEN-mediated gene knockout in the present study to elucidate the shared and/or divergent features of a complex ascidian endostyle. The knockout of Ciona Nkx2-1 and FoxE exerted different effects on the morphology of the developing endostyle. The knockout of Nkx2-1 eliminated the expression of both glandular and thyroidal differentiation marker genes, e.g., vWFL1, vWFL2, CiEnds1, TPO, and Duox, while that of FoxE eliminated the expression of the differentiation marker genes, TPO and CiEnds1. The supporting element-related expression of Pax2/5/8a, Pax2/5/8b, FoxQ1, and β-tubulin persisted in the hypoplastic endostyles of Nkx2-1- and FoxE-knockout juveniles. Although the gene regulation of ascidian-specific CiEnds1 remains unclear, these results provide insights into the evolution of the vertebrate thyroid as well as the urochordate endostyle.

    DOI: 10.1007/s00441-022-03679-w

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  • Hiroki Nishida, Masaki Matsuo, Shohei Konishi, Nobuhiko Ohno, Lucia Manni, Takeshi A Onuma .  Germline development during embryogenesis of the larvacean, Oikopleura dioica. .  Developmental biology481   188 - 200   2022.1Germline development during embryogenesis of the larvacean, Oikopleura dioica.Reviewed International coauthorship International journal

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    Germ cells develop into eggs and sperms and represent a lineage that survives through multiple generations. Germ cell specification during embryogenesis proceeds through one of two basic modes: either the cell-autonomous mode or the inductive mode. In the cell-autonomous mode, specification of germ cell fate involves asymmetric partitioning of the specialized maternal cytoplasm, known as the germplasm. Oikopleura dioica is a larvacean (class Appendicularia) and a chordate. It is regarded as a promising animal model for studying chordate development because of its short life cycle (5 days) and small genome size (∼60 ​Mb). We show that their embryos possess germplasm, as observed in ascidians (class Ascidiacea). The vegetal cytoplasm shifted towards the future posterior pole before the first cleavage occurred. A bilateral pair of primordial germ cells (PGC, B11 ​cells) was formed at the posterior pole at the 32-cell stage through two rounds of unequal cleavage. These B11 ​cells did not undergo further division before hatching of the tadpole-shaped larvae. The centrosome-attracting body (CAB) is a subcellular structure that contains the germplasm and plays crucial roles in germ cell development in ascidians. The presence of CAB with germplasm was observed in the germline lineage cells of larvaceans via electron microscopy and using extracted embryos. The CAB appeared at the 8-cell stage and persisted until the middle stage of embryogenesis. The antigen for the phosphorylated histone 3 antibody was localized to the CAB and persisted in the PGC until hatching after the CAB disappeared. Maternal snail mRNA, which encodes a transcription factor, was co-localized with the antigen for the H3S28p antibody. Furthermore, we found a novel PGC-specific subcellular structure that we call the germ body (GB). This study thus highlights the conserved and non-conserved features of germline development between ascidians and larvaceans. The rapid development and short life cycle (five days) of O. dioica would open the way to genetically analyze germ cell development in the future.

    DOI: 10.1016/j.ydbio.2021.10.009

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  • Takeshi A Onuma, Hiroki Nishida .  Developmental biology of the larvacean Oikopleura dioica: Genome resources, functional screening, and imaging. .  Development, growth & differentiation64 ( 1 ) 67 - 82   2021.12Developmental biology of the larvacean Oikopleura dioica: Genome resources, functional screening, and imaging.Invited Reviewed

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    The larvacean Oikopleura dioica is a cosmopolitan planktonic chordate and is closely related to vertebrates. It is characterized by a tadpole-shaped morphology with notochord flanked by muscle in the tail and brain on the dorsal side, a short life cycle of five days, a compact genome of approximately 56 Mb, a simple and transparent body with a small number of cells (~4000 in functional juveniles), invariant embryonic cell lineages, and fast development that ensures complete morphogenesis and organ formation 10 h after fertilization. With these features, this marine chordate is a promising and advantageous animal model in which genetic manipulation is feasible. In this review, we introduce relevant resources and modern techniques that have been developed: (1) Genome and transcriptomes. Oikopleura dioica has the smallest genome among non-parasitic metazoans. Its genome databases have been generated using three geographically distant O. dioica populations, and several intra-species sequence differences are becoming evident; (2) Functional genetic knockdown techniques. Comprehensive screening of genes is feasible using ovarian microinjection and double-strand DNA-induced gene knockdown; and (3) Live imaging of embryos and larvae. Application of these techniques has uncovered novel aspects of development, including meiotic cell arrest, left-right patterning, epidermal cell patterning, and mouth formation involving the connection of ectoderm and endoderm sheets. Oikopleura dioca has become very useful for developmental and evolutionary studies in chordates.

    DOI: 10.1111/dgd.12769

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  • Takeshi A Onuma, Rina Nakanishi, Yasunori Sasakura, Michio Ogasawara .  Nkx2-1 and FoxE regionalize glandular (mucus-producing) and thyroid-equivalent traits in the endostyle of the chordate Oikopleura dioica. .  Developmental biology477   219 - 231   2021.9Nkx2-1 and FoxE regionalize glandular (mucus-producing) and thyroid-equivalent traits in the endostyle of the chordate Oikopleura dioica.Reviewed International journal

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    The endostyle is a ventral pharyngeal organ used for internal filter feeding of basal chordates and is considered homologous to the follicular thyroid of vertebrates. It contains mucus-producing (glandular) and thyroid-equivalent regions organized along the dorsoventral (DV) axis. Although thyroid-related genes (Nkx2-1, FoxE, and thyroid peroxidase (TPO)) are known to be expressed in the endostyle, their roles in establishing regionalization within the organ have not been demonstrated. We report that Nkx2-1 and FoxE are essential for establishing DV axial identity in the endostyle of Oikopleura dioica. Genome and expression analyses showed von Willebrand factor-like (vWFL) and TPO/dual oxidase (Duox)/Nkx2-1/FoxE as orthologs of glandular and thyroid-related genes, respectively. Knockdown experiments showed that Nkx2-1 is necessary for the expression of glandular and thyroid-related genes, whereas FoxE is necessary only for thyroid-related genes. Moreover, Nkx2-1 expression is necessary for FoxE expression in larvae during organogenesis. The results demonstrate the essential roles of Nkx2-1 and FoxE in establishing regionalization in the endostyle, including (1) the Nkx2-1-dependent glandular region, and (2) the Nkx2-1/FoxE-dependent thyroid-equivalent region. DV axial regionalization may be responsible for organizing glandular and thyroid-equivalent traits of the pharynx along the DV axis.

    DOI: 10.1016/j.ydbio.2021.05.021

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  • Martí-Solans J, Godoy-Marín H, Diaz-Gracia M, Onuma TA, Hiroki Nishida H, Albalat R*, Cañestro C* .  Massive gene loss and function shuffling in appendicularians stretch the boundaries of chordate Wnt family evolution. .  Frontiers in Cell and Developmental Biology. in press   2021.6Massive gene loss and function shuffling in appendicularians stretch the boundaries of chordate Wnt family evolution.Reviewed International coauthorship

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  • Ryo Morita, Takeshi A Onuma, Lucia Manni, Nobuhiko Ohno, Hiroki Nishida .  Mouth opening is mediated by separation of dorsal and ventral daughter cells of the lip precursor cells in the larvacean, Oikopleura dioica. .  Development genes and evolution230 ( 5-6 ) 315 - 327   2020.11Mouth opening is mediated by separation of dorsal and ventral daughter cells of the lip precursor cells in the larvacean, Oikopleura dioica.Reviewed International coauthorship International journal

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    Mouth formation involves the processes of mouth opening, formation of the oral cavity, and the development of associated sensory organs. In deuterostomes, the surface ectoderm and the anterior part of the archenteron are reconfigured and reconnected to make a mouth opening. This study of the larval development of the larvacean, Oikopleura dioica, investigates the cellular organization of the oral region, the developmental processes of the mouth, and the formation of associated sensory cells. O. dioica is a simple chordate whose larvae are transparent and have a small number of constituent cells. It completes organ morphogenesis in 7 h, between hatching 3 h after fertilization and the juvenile stage at 10 h, when it attains adult form and starts to feed. It has two types of mechanosensory cell embedded in the oral epithelium, which is a single layer of cells. There are twenty coronal sensory cells in the circumoral nerve ring and two dorsal sensory organ cells. Two bilateral lip precursor cells (LPCs), facing the anterior surface, divide dorsoventrally and make a wedge-shaped cleft between the two daughter cells named the dorsal lip cell (DLC) and the ventral lip cell (VLC). Eventually, the DLC and VLC become detached and separated into dorsal and ventral lips, triggering mouth opening. This is an intriguing example of cell division itself contributing to morphogenesis. The boundary between the ectoderm and endoderm is present between the lip cells and coronal sensory cells. All oral sensory cells, including dorsal sensory organ cells, were of endodermal origin and were not derived from the ectodermal placode. These observations on mouth formation provide a cellular basis for further studies at a molecular level, in this simple chordate.

    DOI: 10.1007/s00427-020-00667-4

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  • Kai Wang, Ryo Tomura, Wei Chen, Miho Kiyooka, Hinako Ishizaki, Tomoyuki Aizu, Yohei Minakuchi, Masahide Seki, Yutaka Suzuki, Tatsuya Omotezako, Ritsuko Suyama, Aki Masunaga, Charles Plessy, Nicholas M Luscombe, Christelle Dantec, Patrick Lemaire, Takehiko Itoh, Atsushi Toyoda, Hiroki Nishida, Takeshi A Onuma .  A genome database for a Japanese population of the larvacean Oikopleura dioica. .  Development, growth & differentiation62 ( 6 ) 450 - 461   2020.8A genome database for a Japanese population of the larvacean Oikopleura dioica.Reviewed International coauthorship

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    The larvacean Oikopleura dioica is a planktonic chordate and is a tunicate that belongs to the closest relatives to vertebrates. Its simple and transparent body, invariant embryonic cell lineages, and short life cycle of 5 days make it a promising model organism for the study of developmental biology. The genome browser OikoBase was established in 2013 using Norwegian O. dioica. However, genome information for other populations is not available, even though many researchers have studied local populations. In the present study, we sequenced using Illumina and PacBio RSII technologies the genome of O. dioica from a southwestern Japanese population that was cultured in our laboratory for 3 years. The genome of Japanese O. dioica was assembled into 576 scaffold sequences with a total length and N50 length of 56.6 and 1.5 Mb, respectively. A total of 18,743 gene models (transcript models) were predicted in the genome assembly, named OSKA2016. In addition, 19,277 non-redundant transcripts were assembled using RNA-seq data. The OSKA2016 has global sequence similarity of only 86.5% when compared with the OikoBase, highlighting the sequence difference between the two far distant O. dioica populations on the globe. The genome assembly, transcript assembly, and transcript models were incorporated into ANISEED (https://www.aniseed.cnrs.fr/) for genome browsing and BLAST searches. Mapping of reads obtained from male- or female-specific genome libraries yielded male-specific scaffolds in the OSKA2016 and revealed that over 2.6 Mb of sequence were included in the male-specific Y-region. The genome and transcriptome resources from two distinct populations will be useful datasets for developmental biology, evolutionary biology, and molecular ecology using this model organism.

    DOI: 10.1111/dgd.12689

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  • Masaki Matsuo, Takeshi A Onuma, Tatsuya Omotezako, Hiroki Nishida .  Protein phosphatase 2A is essential to maintain meiotic arrest, and to prevent Ca2+ burst at spawning and eventual parthenogenesis in the larvacean Oikopleura dioica. .  Developmental biology460 ( 2 ) 155 - 163   2020.4Protein phosphatase 2A is essential to maintain meiotic arrest, and to prevent Ca2+ burst at spawning and eventual parthenogenesis in the larvacean Oikopleura dioica.Reviewed International journal

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    Unfertilized eggs of most animals are arrested at a certain point in the meiotic cell cycles. Reinitiation of meiosis and the start of embryogenesis are triggered by fertilization. This arrest is essential for preventing parthenogenetic activation and for promoting proper initiation of development by fertilization. In the larvacean Oikopleura dioica, which is a simple model organism for studies of chordate development, the unfertilized egg is arrested at metaphase of meiosis I. We show here that protein phosphatase 2A (PP2A) is essential for maintenance of meiotic arrest after spawning of oocytes. Knockdown (KD) of the maternal PP2A catalytic subunit, which was found in functional screening of maternal factors, caused unfertilized eggs to spontaneously release polar bodies after spawning, and then start pseudo-cleavages without fertilization, namely, parthenogenesis. Parthenogenetic embryos failed to undergo proper mitosis and cytokinesis because of lack of a centrosome, which is to be brought into the egg by a sperm. Activation of the KD oocytes was triggered by possible rise of ambient and intracellular pH upon their release from the gonad into seawater at spawning. Live recording of intracellular calcium level of the KD oocytes indicated that the pH rise caused an aberrant Ca2+ burst, which mimicked the Ca2+ burst that occurs at fertilization. Then, the aberrant Ca2+ burst triggered meiosis resumption through Calcium/calmodulin-dependent protein kinase (CaMK II). Therefore, PP2A is essential for maintenance of meiotic arrest and prevention of parthenogenesis by suppressing the aberrant Ca2+ burst at spawning.

    DOI: 10.1016/j.ydbio.2019.12.005

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  • Takeshi A Onuma, Momoko Hayashi, Fuki Gyoja, Kanae Kishi, Kai Wang, Hiroki Nishida .  A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left-right patterning. .  Proceedings of the National Academy of Sciences of the United States of America117 ( 8 ) 4188 - 4198   2020.2A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left-right patterning.Reviewed International coauthorship International journal

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    Larvaceans are chordates with a tadpole-like morphology. In contrast to most chordates of which early embryonic morphology is bilaterally symmetric and the left-right (L-R) axis is specified by the Nodal pathway later on, invariant L-R asymmetry emerges in four-cell embryos of larvaceans. The asymmetric cell arrangements exist through development of the tailbud. The tail thus twists 90° in a counterclockwise direction relative to the trunk, and the tail nerve cord localizes on the left side. Here, we demonstrate that larvacean embryos have nonconventional L-R asymmetries: 1) L- and R-cells of the two-cell embryo had remarkably asymmetric cell fates; 2) Ca2+ oscillation occurred through embryogenesis; 3) Nodal, an evolutionarily conserved left-determining gene, was absent in the genome; and 4) bone morphogenetic protein gene (Bmp) homolog Bmp.a showed right-sided expression in the tailbud and larvae. We also showed that Ca2+ oscillation is required for Bmp.a expression, and that BMP signaling suppresses ectopic expression of neural genes. These results indicate that there is a chordate species lacking Nodal that utilizes Ca2+ oscillation and Bmp.a for embryonic L-R patterning. The right-side Bmp.a expression may have arisen via cooption of conventional BMP signaling in order to restrict neural gene expression on the left side.

    DOI: 10.1073/pnas.1916858117

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  • Justine Dardaillon, Delphine Dauga, Paul Simion, Emmanuel Faure, Takeshi A Onuma, Melissa B DeBiasse, Alexandra Louis, Kazuhiro R Nitta, Magali Naville, Lydia Besnardeau, Wendy Reeves, Kai Wang, Marie Fagotto, Marion Guéroult-Bellone, Shigeki Fujiwara, Rémi Dumollard, Michael Veeman, Jean-Nicolas Volff, Hugues Roest Crollius, Emmanuel Douzery, Joseph F Ryan, Bradley Davidson, Hiroki Nishida, Christelle Dantec, Patrick Lemaire .  ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates. .  Nucleic acids research48 ( D1 ) D668 - D675   2020.1ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.Reviewed International coauthorship International journal

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    ANISEED (https://www.aniseed.cnrs.fr) is the main model organism database for the worldwide community of scientists working on tunicates, the vertebrate sister-group. Information provided for each species includes functionally-annotated gene and transcript models with orthology relationships within tunicates, and with echinoderms, cephalochordates and vertebrates. Beyond genes the system describes other genetic elements, including repeated elements and cis-regulatory modules. Gene expression profiles for several thousand genes are formalized in both wild-type and experimentally-manipulated conditions, using formal anatomical ontologies. These data can be explored through three complementary types of browsers, each offering a different view-point. A developmental browser summarizes the information in a gene- or territory-centric manner. Advanced genomic browsers integrate the genetic features surrounding genes or gene sets within a species. A Genomicus synteny browser explores the conservation of local gene order across deuterostome. This new release covers an extended taxonomic range of 14 species, including for the first time a non-ascidian species, the appendicularian Oikopleura dioica. Functional annotations, provided for each species, were enhanced through a combination of manual curation of gene models and the development of an improved orthology detection pipeline. Finally, gene expression profiles and anatomical territories can be explored in 4D online through the newly developed Morphonet morphogenetic browser.

    DOI: 10.1093/nar/gkz955

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  • Atsuo Iida, Hiroyuki N Arai, Yumiko Someya, Mayu Inokuchi, Takeshi A Onuma, Hayato Yokoi, Tohru Suzuki, Eiichi Hondo, Kaori Sano .  Mother-to-embryo vitellogenin transport in a viviparous teleost Xenotoca eiseni. .  Proceedings of the National Academy of Sciences of the United States of America116 ( 44 ) 22359 - 22365   2019.10Mother-to-embryo vitellogenin transport in a viviparous teleost Xenotoca eiseni.Reviewed International journal

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    Vitellogenin (Vtg), a yolk nutrient protein that is synthesized in the livers of female animals, and subsequently carried into the ovary, contributes to vitellogenesis in oviparous animals. Thus, Vtg levels are elevated during oogenesis. In contrast, Vtg proteins have been genetically lost in viviparous mammals, thus the yolk protein is not involved in their oogenesis and embryonic development. In this study, we identified Vtg protein in the livers of females during the gestation of the viviparous teleost, Xenotoca eiseni Although vitellogenesis is arrested during gestation, biochemical assays revealed that Vtg protein was present in ovarian tissues and lumen fluid. The Vtg protein was also detected in the trophotaeniae of the intraovarian embryo. Immunoelectron microscopy revealed that Vtg protein is absorbed into intracellular vesicles in the epithelial cells of the trophotaeniae. Furthermore, extraneous Vtg protein injected into the abdominal cavity of a pregnant female was subsequently detected in the trophotaeniae of the intraovarian embryo. Our data suggest that the yolk protein is one of the matrotrophic factors supplied from the mother to the intraovarian embryo during gestation in X. eiseni.

    DOI: 10.1073/pnas.1913012116

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  • Shiori Yamada, Yuka Tanaka, Kaoru S Imai, Motohiko Saigou, Takeshi A Onuma, Hiroki Nishida .  Wavy movements of epidermis monocilia drive the neurula rotation that determines left-right asymmetry in ascidian embryos. .  Developmental biology448 ( 2 ) 173 - 182   2019.4Wavy movements of epidermis monocilia drive the neurula rotation that determines left-right asymmetry in ascidian embryos.Reviewed International journal

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    Tadpole larvae of the ascidian, Halocynthia roretzi, show morphological left-right asymmetry in the brain structures and the orientation of tail bending within the vitelline membrane. Neurula embryos rotate along the anterior-posterior axis in a counterclockwise direction, and then this rotation stops when the left side of the embryo is oriented downwards. Contact of the left-side epidermis with the vitelline membrane promotes nodal gene expression in the left-side epidermis. This is a novel mechanism in which rotation of whole embryos provides the initial cue for breaking left-right symmetry. Here we show that epidermal monocilia, which appear at the neurula rotation stage, generate the driving force for rotation. A ciliary protein, Arl13b, fused with Venus YFP was used for live imaging of ciliary movements. Although overexpression of wild-type Arl13b fusion protein resulted in aberrant movements of the cilia and abrogation of neurula rotation, mutant Arl13b fusion protein, in which the GTPase and coiled-coil domains were removed, did not affect the normal ciliary movements and neurula rotation. Epidermis cilia moved in a wavy and serpentine way like sperm flagella but not in a rotational way or beating way with effective stroke and recovery stroke. They moved very slowly, at 1/7 Hz, consistent with the low angular velocity of neurula rotation (ca. 43°/min). The tips of most cilia pointed in the opposite direction of embryonic rotation. Similar motility was also observed in Ciona robusta embryos. When embryos were treated with a dynein inhibitor, Ciliobrevin D, both ciliary movements and neurula rotation were abrogated, showing that ciliary movements drive neurula rotation in Halocynthia. The drug also inhibited Ciona neurula rotation. Our observations suggest that the driving force of rotation is generated using the vitelline membrane as a substrate but not by making a water current around the embryo. It is of evolutionary interest that ascidians use ciliary movements to break embryonic left-right symmetry, like in many vertebrates. Meanwhile, ascidian embryos rotate as a whole, similar to embryos of non-vertebrate deuterostomes, such as echinoderm, hemichordate, and amphioxus, while swimming.

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  • Takeshi A Onuma, Masaki Matsuo, Hiroki Nishida .  Modified whole-mount in situ hybridisation and immunohistochemistry protocols without removal of the vitelline membrane in the appendicularian Oikopleura dioica. .  Development genes and evolution227 ( 5 ) 367 - 374   2017.9Modified whole-mount in situ hybridisation and immunohistochemistry protocols without removal of the vitelline membrane in the appendicularian Oikopleura dioica.Reviewed International journal

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    The appendicularian Oikopleura dioica is a planktonic chordate that retains a tadpole shape throughout its life. Its simple and transparent body, invariant cell lineages, fast development and available genome and transcriptome resources make it a promising model organism for research in developmental biology. However, large-scale analysis of gene expression in O. dioica is limited owing to the laborious and time-consuming process of manual removal of the vitelline membrane, because devitellinisation of pre-hatching embryos causes failure of normal development. Therefore, in this study, modified procedures were developed for whole-mount in situ hybridisation (WISH) and immunohistochemistry (WIHC). This protocol enables rapid mRNA or protein detection without a manual devitellination step for each specimen. The critical procedure is brief treatment of the vitelline membrane of living embryos with 0.05% actinase E before fixation. Two minutes of treatment was optimal for the penetration of antisense RNA probes and antibodies through the vitelline membrane. This WISH protocol was applicable for chromogenic and fluorescent tyramide signal amplification reactions. Using the new protocol, we found eight genes with tissue-specific expression in the tail muscle, trunk epidermis, heart, pharynx, oesophagus, stomach or gill openings of developing larvae. This procedure also allowed for the detection of exogenous FLAG-tagged histone-enhanced green fluorescent protein by WIHC using anti-FLAG antibody. This study provides a useful and convenient tool for studying spatial and temporal gene expression patterns in this simple chordate model and should facilitate handling large amounts of genetic data from transcriptome-based approaches and other techniques such as treatments with chemical inhibitors.

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  • Kanae Kishi, Momoko Hayashi, Takeshi A Onuma, Hiroki Nishida .  Patterning and morphogenesis of the intricate but stereotyped oikoplastic epidermis of the appendicularian, Oikopleura dioica. .  Developmental biology428 ( 1 ) 245 - 257   2017.8Patterning and morphogenesis of the intricate but stereotyped oikoplastic epidermis of the appendicularian, Oikopleura dioica.Reviewed International journal

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    Mechanisms for morphogenetic processes that generate complex patterns in a reproducible manner remain elusive. Live imaging provides a powerful tool to record cell behaviors. The appendicularian, Oikopleura dioica, is a planktonic tunicate that has a rapid developmental speed, small number of cells (less than 3500 cells in a juvenile), and a transparent body. The trunk epidermis, called the oikoplastic epithelium (OE), has elaborate cellular arrangements showing a complex pattern to secrete so-called "house" made of extracellular components. The OE is characterized by invariant number, size, and shape of the monolayer epithelial cells. Pattern formation is achieved during 5h of larval development without growth of the body, making this a suitable system for live imaging of a two-dimensional (2D) sheet. First, we subdivided the OE and defined several domains by cellular resolution, and systematically gave names to the constituent cells, since there is no variation among individuals. Time-lapse imaging of the epidermal cells revealed region-specific pattern formation processes. Each identified domain served as a compartment into which distribution of descendant cells of founder cells is restricted. Regulation of orientation, timing, and the number of rounds of cell divisions, but not cell death and migration, was a critical mechanism for determination of final cell arrangement and size. In addition, displacement of epithelial sheet plates was observed in the Eisen domain. Stem-cell-like cell divisions, whereby large mother stem cells generate a chain of small daughter cells, were involved in formation of the Nasse region and ventral sensory organ. These are the first examples of this kind of stem-cell-like cell division in deuterostomes. Furthermore, labeling of the left or right blastomere of the two-cell-stage embryo, which roughly gives rise to the left or right side of the body, respectively, revealed that the boundary of the descendant cells does not match with the midline of the trunk epidermis. Left and right descendants largely invade into the opposite side in an invariant way, suggesting the possibility that specification of the OE cell identities may occur later in development, most probably around hatching, and depending on cell position in the OE epithelial sheet. These detailed descriptions of OE patterning processes provide basic and essential information to analyze further cell behaviors in the generation of elaborate and intricate but stereotyped 2D cellular patterns in this advantageous model system for developmental and cell biological studies in chordates.

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  • Kai Wang, Christelle Dantec, Patrick Lemaire, Takeshi A Onuma, Hiroki Nishida .  Genome-wide survey of miRNAs and their evolutionary history in the ascidian, Halocynthia roretzi. .  BMC genomics18 ( 1 ) 314 - 314   2017.4Genome-wide survey of miRNAs and their evolutionary history in the ascidian, Halocynthia roretzi.Reviewed International coauthorship International journal

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    BACKGROUND: miRNAs play essential roles in the modulation of cellular functions via degradation and/or translation attenuation of target mRNAs. They have been surveyed in a single ascidian genus, Ciona. Recently, an annotated draft genome sequence for a distantly related ascidian, Halocynthia roretzi, has become available, but miRNAs in H. roretzi have not been previously studied. RESULTS: We report the prediction of 319 candidate H. roretzi miRNAs, obtained through three complementary methods. Experimental validation suggests that more than half of these candidate miRNAs are expressed during embryogenesis. The majority of predicted H. roretzi miRNAs appear specific to ascidians or tunicates, and only 32 candidates, belonging to 25 families, are widely conserved across metazoans. CONCLUSION: Our study presents a comprehensive identification of candidate H. roretzi miRNAs. This resource will facilitate the study of the mechanisms for miRNA-controlled gene regulatory networks during ascidian development. Further, our analysis suggests that the majority of Halocynthia miRNAs are specific to ascidian or tunicates, with only a small number of widely conserved miRNAs. This result is consistent with the general notion that animal miRNAs are less conserved between taxa than plant ones.

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  • Tatsuya Omotezako, Masaki Matsuo, Takeshi A Onuma, Hiroki Nishida .  DNA interference-mediated screening of maternal factors in the chordate Oikopleura dioica. .  Scientific reports7   44226 - 44226   2017.3DNA interference-mediated screening of maternal factors in the chordate Oikopleura dioica.Reviewed International journal

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    The maternal contribution to the oocyte cytoplasm plays an important role during embryogenesis because it is involved in early cell fate specification and embryonic axis establishment. However, screening projects targeting maternal factors have only been conducted in a limited number of animal models, such as nematodes, fruit flies, and zebrafish, while few maternal genes have been analysed because of difficulties encountered in inhibiting gene products already expressed in the ovaries. Therefore, simple and efficient methods for large-scale maternal screening are necessary. The appendicularian Oikopleura dioica is a planktonic tunicate member of the chordates. Gonadal microinjection and a novel gene knockdown method, DNA interference (DNAi), have been developed for use in this animal with the aim of inhibiting gene functions during oogenesis within the gonad. In this study, we adapted these methods for large-scale maternal factor screening, and observed malformation phenotypes related to some maternal factors. Approximately 2000 (56.9%) ovary-enriched gene products were screened, of which the knockdown of seven encoding genes resulted in various abnormalities during embryonic development. Most of these were related to microtubules and cell adhesion-related proteins. We conclude that DNAi is a potentially powerful screening tool for the identification of novel maternal factors in chordates.

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  • Takeshi A Onuma, Miho Isobe, Hiroki Nishida .  Internal and external morphology of adults of the appendicularian, Oikopleura dioica: an SEM study. .  Cell and tissue research367 ( 2 ) 213 - 227   2017.2Internal and external morphology of adults of the appendicularian, Oikopleura dioica: an SEM study.Reviewed International journal

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    The appendicularian, Oikopleura dioica, is a planktonic tunicate that retains a swimming tadpole shape throughout its life. It has relatively few cells and exhibits fast development, yet it has a basic chordate body plan. In this study, the morphology of adults was investigated using scanning electron microscopy (SEM) and fine 3D images of most organs were taken. The trunk epidermis is organized into bilateral territories secreting the house that includes the food-trapping filter. The pharynx extends ventrally and posteriorly to the gill openings and esophagus, respectively. The endostyle, with a morphologically distinct ciliated band, is embedded in the pharynx. The digestive tract showed left-right asymmetry as the connection between the pharynx and esophagus tilts leftward. The heart is located ventrally between the left stomach and the intestine and consists of a left muscular sheet and a right thin, non-muscular sheet. The brain is connected to the oral and ventral sensory organs, ciliary funnels and sensory vesicles and axons descend from it that eventually innervate the caudal ganglion. In the tail, a nerve cord with sporadically distributed neuronal somata runs along the left side of the notochord. The gonad is a single syncytium of thousands of gametes. In the ovary, an abundance of cortical membrane invaginate into the cytoplasm during oogenesis and the growing oocytes are interconnected via common cytoplasm through a ring canal. Spermatogenesis progresses synchronously within the common cytoplasm. These descriptions provide a valuable anatomical atlas for studying development and physiology using this simple organism with a chordate body plan.

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  • Hitoshi Kodama, Yoshimasa Miyata, Mami Kuwajima, Ryoichi Izuchi, Ayumi Kobayashi, Fuki Gyoja, Takeshi A Onuma, Gaku Kumano, Hiroki Nishida .  Redundant mechanisms are involved in suppression of default cell fates during embryonic mesenchyme and notochord induction in ascidians. .  Developmental biology416 ( 1 ) 162 - 172   2016.8Redundant mechanisms are involved in suppression of default cell fates during embryonic mesenchyme and notochord induction in ascidians.Invited Reviewed International journal

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    During embryonic induction, the responding cells invoke an induced developmental program, whereas in the absence of an inducing signal, they assume a default uninduced cell fate. Suppression of the default fate during the inductive event is crucial for choice of the binary cell fate. In contrast to the mechanisms that promote an induced cell fate, those that suppress the default fate have been overlooked. Upon induction, intracellular signal transduction results in activation of genes encoding key transcription factors for induced tissue differentiation. It is elusive whether an induced key transcription factor has dual functions involving suppression of the default fates and promotion of the induced fate, or whether suppression of the default fate is independently regulated by other factors that are also downstream of the signaling cascade. We show that during ascidian embryonic induction, default fates were suppressed by multifold redundant mechanisms. The key transcription factor, Twist-related.a, which is required for mesenchyme differentiation, and another independent transcription factor, Lhx3, which is dispensable for mesenchyme differentiation, sequentially and redundantly suppress the default muscle fate in induced mesenchyme cells. Similarly in notochord induction, Brachyury, which is required for notochord differentiation, and other factors, Lhx3 and Mnx, are likely to suppress the default nerve cord fate redundantly. Lhx3 commonly suppresses the default fates in two kinds of induction. Mis-activation of the autonomously executed default program in induced cells is detrimental to choice of the binary cell fate. Multifold redundant mechanisms would be required for suppression of the default fate to be secure.

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  • Kai Wang, Tatsuya Omotezako, Kanae Kishi, Hiroki Nishida, Takeshi A Onuma .  Maternal and zygotic transcriptomes in the appendicularian, Oikopleura dioica: novel protein-encoding genes, intra-species sequence variations, and trans-spliced RNA leader. .  Development genes and evolution225 ( 3 ) 149 - 59   2015.6Maternal and zygotic transcriptomes in the appendicularian, Oikopleura dioica: novel protein-encoding genes, intra-species sequence variations, and trans-spliced RNA leader.Reviewed International journal

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    RNA sequencing analysis was carried out to characterize egg and larval transcriptomes in the appendicularian, Oikopleura dioica, a planktonic chordate, which is characterized by rapid development and short life cycle of 5 days, using a Japanese population of the organism. De novo transcriptome assembly matched with 16,423 proteins corresponding to 95.4% of the protein-encoding genes deposited in the OikoBase, the genome database of the Norwegian population. Nucleotide and amino acid sequence identities between the Japanese and Norwegian O. dioica were estimated to be around 91.0 and 94.8%, respectively. We discovered 175 novel protein-encoding genes: 144 unigenes were common to both the Japanese and Norwegian populations, whereas 31 unigenes were not found in the OikoBase genome reference. Among the total 12,311 unigenes, approximately 63% were detected in egg-stage RNAs, whereas 99% were detected in larval stage RNAs; 3772 genes were up-regulated, and 1336 genes were down-regulated more than four-fold in the larvae. Gene ontology analyses characterized gene activities in these two developmental stages. We found a messenger RNA (mRNA) 5' trans-spliced leader, which was observed in 40.8% of the total unique transcripts. It showed preferential linkage to adenine at the 5' ends of the downstream exons. Trans-splicing was observed more frequently in egg mRNAs compared with larva-specific mRNAs.

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  • Tatsuya Omotezako, Takeshi A Onuma, Hiroki Nishida .  DNA interference: DNA-induced gene silencing in the appendicularian Oikopleura dioica. .  Proceedings. Biological sciences282 ( 1807 ) 20150435 - 20150435   2015.5DNA interference: DNA-induced gene silencing in the appendicularian Oikopleura dioica.Reviewed International journal

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    RNA interference is widely employed as a gene-silencing system in eukaryotes for host defence against invading nucleic acids. In response to invading double-stranded RNA (dsRNA), mRNA is degraded in sequence-specific manner. So far, however, DNA interference (DNAi) has been reported only in plants, ciliates and archaea, and has not been explored in Metazoa. Here, we demonstrate that linear double-stranded DNA promotes both sequence-specific transcription blocking and mRNA degradation in developing embryos of the appendicularian Oikopleura dioica. Introduced polymerase chain reaction (PCR) products or linearized plasmids encoding Brachyury induced tail malformation and mRNA degradation. This malformation was also promoted by DNA fragments of the putative 5'-flanking region and intron without the coding region. PCR products encoding Zic-like1 and acetylcholine esterase also induced loss of sensory organ and muscle acetylcholinesterase activity, respectively. Co-injection of mRNA encoding EGFP and mCherry, and PCR products encoding these fluorescent proteins, induced sequence-specific decrease in the green or red fluorescence, respectively. These results suggest that O. dioica possesses a defence system against exogenous DNA and RNA, and that DNA fragment-induced gene silencing would be mediated through transcription blocking as well as mRNA degradation. This is the first report of DNAi in Metazoa.

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  • Kanae Kishi, Takeshi A Onuma, Hiroki Nishida .  Long-distance cell migration during larval development in the appendicularian, Oikopleura dioica. .  Developmental biology395 ( 2 ) 299 - 306   2014.11Long-distance cell migration during larval development in the appendicularian, Oikopleura dioica.Reviewed International journal

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    The appendicularian, Oikopleura dioica, is a planktonic chordate. Its simple and transparent body, invariant cell lineages and short life cycle of 5 days make it a promising model organism for studies of chordate development. Here we describe the cell migration that occurs during development of the O. dioica larva. Using time-lapse imaging facilitated by florescent labeling of cells, three cell populations exhibiting long-distance migration were identified and characterized. These included (i) a multinucleated oral gland precursor that migrates anteriorly within the trunk region and eventually separates into the left and right sides, (ii) endodermal strand cells that are collectively retracted from the tail into the trunk in a tractor movement, and (iii) two subchordal cell precursors that individually migrate out from the trunk to the tip of the tail. The migration of subchordal cell precursors starts when all of the endodermal strand cells enter the trunk, and follows the same path but in a direction opposite to that of the latter. Labeling of these cells with a photoconvertible fluorescent protein, Kaede, demonstrated that the endodermal strand cells and subchordal cell precursors have distinct origins and eventual fates. Surgical removal of the trunk from the tail demonstrated that the endodermal strand cells do not require the trunk for migration, and that the subchordal cell precursors would be attracted by the distal part of the tail. This well-defined, invariant and traceable long-distance cell migration provides a unique experimental system for exploring the mechanisms of versatile cell migration in this simple organism with a chordate body plan.

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  • Tatsuya Omotezako, Atsuo Nishino, Takeshi A Onuma, Hiroki Nishida .  RNA interference in the appendicularian Oikopleura dioica reveals the function of the Brachyury gene. .  Development genes and evolution223 ( 4 ) 261 - 7   2013.7RNA interference in the appendicularian Oikopleura dioica reveals the function of the Brachyury gene.Reviewed International journal

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    The appendicularian Oikopleura dioica is a chordate that has a remarkably simple adult body with small cell number. Its transparency, stereotyped cell lineages, short life cycle, and small genome make it a promising new experimental model of chordate developmental biology. However, the functions of its various genes are still poorly understood due to lack of a tool for suppression of gene expression. Here, we applied a double-stranded RNA (dsRNA)-based-RNA interference (RNAi) method in O. dioica. For introducing dsRNA into eggs and embryos, we injected dsRNAs into the ovary. dsRNA, which is specific to EGFP or mCherry mRNA, decreased the exogenous mRNA-derived fluorescence in both eggs and embryos. dsRNA specific to the Brachyury gene of O. dioica, which is a homologous gene of a key notochord transcriptional factor in ascidians, triggered degradation of endogenous Brachyury mRNA and induced malformation or loss of the notochord in the tail. This effect was Brachyury sequence specific, as three dsRNAs covering different sequences produced the same phenotype. The result is in accordance with its expression site and also with the key regulatory function of Brachyury in notochord formation in other chordates. RNAi in O. dioica would be a useful tool for gaining insight into the oogenesis and early developmental processes in chordates.

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  • Takeshi A Onuma, Cunming Duan .  Duplicated Kiss1 receptor genes in zebrafish: distinct gene expression patterns, different ligand selectivity, and a novel nuclear isoform with transactivating activity. .  FASEB journal : official publication of the Federation of American Societies for Experimental Biology26 ( 7 ) 2941 - 50   2012.7Duplicated Kiss1 receptor genes in zebrafish: distinct gene expression patterns, different ligand selectivity, and a novel nuclear isoform with transactivating activity.Reviewed International journal

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    The kisspeptin (Kiss1) and Kiss1 receptor (Kiss1r) pathway plays a central role in the neuroendocrine control of reproduction. In contrast to humans and mammals that have a single Kiss1 gene and a single Kiss1r gene, multiple Kiss ligand and receptor genes are found in nonmammalian vertebrates. Their functional relationship, however, is poorly understood. Here, we report that the duplicated zebrafish kiss1r genes have evolved a distinct gene expression pattern, different ligand selectivity, and novel nuclear isoforms. While a single kiss1ra mRNA was detected exclusively in the brain, 5 kiss1rb transcripts were found in many peripheral tissues. Functional assays showed that kiss1ra encodes a receptor activated by both Kiss1 and Kiss2, while kiss1rb encodes a receptor that has a preference for Kiss1. The four alternatively spliced kiss1rb mRNAs encoded 4 truncated isoforms, denoted kiss1rb-derived protein (KRBDP)1-4. When their subcellular localization was examined, KRBDP3 and KRBDP4 were found in the nucleus in cultured mammalian cells and in zebrafish embryos. One-hybrid transcription activation assays revealed that KRBDP3, but not KRBDP4, possesses ligand-independent transactivation activity. These findings highlight how the duplication of Kiss1r genes may facilitate their adaptation of specialized functions. The discovery of a nuclear Kiss1r isoform raises the possibility of novel function of Kiss1r in the nucleus.

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  • Takeshi A Onuma, Yonghe Ding, Eytan Abraham, Yonathern Zohar, Hironori Ando, Cunming Duan .  Regulation of temporal and spatial organization of newborn GnRH neurons by IGF signaling in zebrafish. .  The Journal of neuroscience : the official journal of the Society for Neuroscience31 ( 33 ) 11814 - 24   2011.8Regulation of temporal and spatial organization of newborn GnRH neurons by IGF signaling in zebrafish.Reviewed International coauthorship International journal

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    When and how newborn neurons are organized to form a functional network in the developing brain remains poorly understood. An attractive model is the gonadotropin-releasing hormone (GnRH) neuron system, master regulator of the reproductive axis. Here we show that blockage of IGF signaling, a central growth-promoting signaling pathway, by the induced expression of a dominant-negative form of IGF1 receptor (IGF1R) or specific IGF1R inhibitors delayed the emergence of GnRH2 neurons in the midbrain and GnRH3 neurons in the olfactory bulb region. Blockage of IGF signaling also resulted in an abnormal appearance of GnRH3 neurons outside of the olfactory bulb region, although it did not change the locations of other olfactory neurons, GnRH2 neurons, or brain patterning. This IGF action is developmental stage-dependent because the blockade of IGF signaling in advanced embryos had no such effect. An application of phosphatidylinositol 3-kinase (PI3K) inhibitors phenocopied the IGF signaling deficient embryos, whereas the MAPK inhibitors had no effect, suggesting that this IGF action is mediated through the PI3K pathway. Real-time in vivo imaging studies revealed that the ectopic GnRH3 neurons emerged at the same time as the normal GnRH3 neurons in IGF-deficient embryos. Further experiments suggest that IGF signaling affects the spatial distribution of newborn GnRH3 neurons by influencing neural crest cell migration and/or differentiation. These results suggest that the IGF-IGF1R-PI3K pathway regulates the precise temporal and spatial organization of GnRH neurons in zebrafish and provides new insights into the regulation of GnRH neuron development.

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  • Takeshi A Onuma, Keita Makino, Hironori Ando, Masatoshi Ban, Masa-Aki Fukuwaka, Tomonori Azumaya, Akihisa Urano .  Expression of GnRH genes is elevated in discrete brain loci of chum salmon before initiation of homing behavior and during spawning migration. .  General and comparative endocrinology168 ( 3 ) 356 - 68   2010.9Expression of GnRH genes is elevated in discrete brain loci of chum salmon before initiation of homing behavior and during spawning migration.Reviewed International coauthorship International journal

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    Our previous studies suggested the importance of gonadotropin-releasing hormones (GnRHs) for initiation of spawning migration of chum salmon, although supporting evidence had been not available from oceanic fish. In farmed masu salmon, the amounts of salmon GnRH (sGnRH) mRNAs in the forebrain increased in the pre-pubertal stage from winter through spring, followed by a decrease toward summer. We thus hypothesized that gene expression for GnRHs in oceanic chum salmon changes similarly, and examined this hypothesis using brain samples from winter chum salmon in the Gulf of Alaska and summer fish in the Bering Sea. They were classified into sexually immature and maturing adults, which had maturing gonads and left the Bering Sea for the natal river by the end of summer. The absolute amounts of GnRH mRNAs were determined by real-time PCRs. The amounts of sGnRH mRNA in the maturing winter adults were significantly larger than those in the maturing summer adults. The amounts of sGnRH and chicken GnRH mRNAs then peaked during upstream migration from the coast to the natal hatchery. Such changes were observed in various brain loci including the olfactory bulb, terminal nerve, ventral telencephalon, nucleus preopticus parvocellularis anterioris, nucleus preopticus magnocellularis and midbrain tegmentum. These results suggest that sGnRH neurons change their activity for gonadal maturation prior to initiation of homing behavior from the Bering Sea. The present study provides the first evidence to support a possible involvement of neuropeptides in the onset of spawning migration.

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  • Takeshi A Onuma, Masatoshi Ban, Keita Makino, Hiroshi Katsumata, WeiWei Hu, Hironori Ando, Masa-aki Fukuwaka, Tomonori Azumaya, Akihisa Urano .  Changes in gene expression for GH/PRL/SL family hormones in the pituitaries of homing chum salmon during ocean migration through upstream migration. .  General and comparative endocrinology166 ( 3 ) 537 - 48   2010.5Changes in gene expression for GH/PRL/SL family hormones in the pituitaries of homing chum salmon during ocean migration through upstream migration.Reviewed International coauthorship International journal

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    Gene expression for growth hormone (GH)/prolactin (PRL)/somatolactin (SL) family hormones in the pituitaries of homing chum salmon were examined, because gene expression for these hormones during ocean-migrating phases remains unclear. Fish were collected in the winter Gulf of Alaska, the summer Bering Sea and along homing pathway in the Ishikari River-Ishikari Bay water system in Hokkaido, Japan in autumn. The oceanic fish included maturing adults, which had developing gonads and left the Bering Sea for the natal river by the end of summer. The absolute amounts of GH, PRL and SL mRNAs in the pituitaries of the maturing adults in the summer Bering Sea were 5- to 20-fold those in the winter Gulf of Alaska. The amount of GH mRNA in the homing adults at the coastal seawater (SW) areas was smaller than that in the Bering fish, while the amount of PRL mRNA remained at the higher level until fish arrived at the Ishikari River. The gill Na(+),K(+)-ATPase activity in the coastal SW fish and the plasma Na(+) levels in the brackish water fish at the estuary were lowered to the levels that were comparable to those in the fresh water (FW) fish. In conclusion, gene expression for GH, PRL and SL was elevated in the pituitaries of chum salmon before initiation of homing behavior from the summer Bering Sea. Gene expression for GH is thereafter lowered coincidently with malfunction of SW adaptability in the breeding season, while gene expression for PRL is maintained high until forthcoming FW adaptation.

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  • Takeshi A Onuma, Keita Makino, Hiroshi Katsumata, Brian R Beckman, Masatoshi Ban, Hironori Ando, Masa-aki Fukuwaka, Tomonori Azumaya, Penny Swanson, Akihisa Urano .  Changes in the plasma levels of insulin-like growth factor-I from the onset of spawning migration through upstream migration in chum salmon. .  General and comparative endocrinology165 ( 2 ) 237 - 43   2010.1Changes in the plasma levels of insulin-like growth factor-I from the onset of spawning migration through upstream migration in chum salmon.Reviewed International coauthorship International journal

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    An increase in activity of the pituitary-gonadal axis (PG-axis) and gonadal development are essential for the onset of spawning migration of chum salmon from the Bering Sea. In the Bering Sea, fish with larger body sizes initiated gonadal development and commenced spawning migration to the natal river by the end of summer. We thus hypothesized that insulin-like growth factor-I (IGF-I), a somatotropic signal that interacts with the PG-axis, can be one of such factors responsible for the onset of migration, and examined changes in plasma levels and hepatic expression of IGF-I gene in oceanic and homing chum salmon in 2001-2003. The plasma IGF-I levels and corresponding body sizes in maturing adults, which had developing gonads, were significantly higher than those in immature fish in all years examined. Such increase in the plasma IGF-I levels in maturing fish was observed even in the Gulf of Alaska during February 2006, while coincident increase was not observed in the hepatic amounts of IGF-I mRNA. In autumn, the plasma IGF-I levels in homing adults decreased during upstream migration in the Ishikari River-Ishikari bay water system in Hokkaido, Japan. In conclusion, the plasma IGF-I levels increased with gonadal development when chum salmon migrated from the winter Gulf of Alaska to the summer Bering Sea. Circulating IGF-I may interact with the PG-axis and promote gonadal development that is inseparable from the onset of spawning migration. Circulating IGF-I levels were thereafter lowered in accordance with final maturation during upstream migration in the breeding season.

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  • Takeshi A Onuma, Keita Makino, Masatoshi Ban, Hironori Ando, Masa-aki Fukuwaka, Tomonori Azumaya, Penny Swanson, Akihisa Urano .  Elevation of the plasma level of insulin-like growth factor-I with reproductive maturation prior to initiation of spawning migration of chum salmon. .  Annals of the New York Academy of Sciences1163   497 - 500   2009.4Elevation of the plasma level of insulin-like growth factor-I with reproductive maturation prior to initiation of spawning migration of chum salmon.Reviewed International coauthorship International journal

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    When, where, and how oceanic chum salmon initiate spawning migration is unknown although gonadal development and elevation of the activity of the pituitary-gonadal axis (PG-axis) are essential. Insulin-like growth factor-I (IGF-I) is a somatotropic signal that interacts with the PG-axis for gametogenesis. We thus examined the plasma level of IGF-I in immature and maturing chum salmon in the Bering Sea and the Gulf of Alaska. The maturing adults which had maturing gonads left the Bering Sea for the natal river by the end of summer, because almost all fish were immature in September. The plasma level of IGF-I and corresponding body size in the maturing adults were two- to threefold that of immature fish. The plasma IGF-I level correlated positively with the pituitary contents of follicle-stimulating hormone and the plasma levels of 11-ketotestosterone and estradiol-17beta. Therefore, the plasma level of IGF-I increased with elevation of the PG-axis activity prior to the initiation of spawning migration from the Bering Sea. Circulatory IGF-I from visceral organs may inform the status of body growth to the PG-axis for gonadal development that is inseparable from decision of chum salmon whether to initiate homing behavior from the Bering Sea or not to initiate spawning migration by the coming spawning season.

    DOI: 10.1111/j.1749-6632.2008.03668.x

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  • Takeshi A Onuma, Shunpei Sato, Hiroshi Katsumata, Keita Makino, Weiwei Hu, Aya Jodo, Nancy D Davis, Jon T Dickey, Masatoshi Ban, Hironori Ando, Masa-Aki Fukuwaka, Tomonori Azumaya, Penny Swanson, Akihisa Urano .  Activity of the pituitary-gonadal axis is increased prior to the onset of spawning migration of chum salmon. .  The Journal of experimental biology212 ( Pt 1 ) 56 - 70   2009.1Activity of the pituitary-gonadal axis is increased prior to the onset of spawning migration of chum salmon.Reviewed International coauthorship International journal

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    The activity of the pituitary-gonadal axis (PG axis) in pre-migratory and homing chum salmon was examined because endocrine mechanisms underlying the onset of spawning migration remain unknown. Pre-migratory fish were caught in the central Bering Sea in June, July and September 2001, 2002 and 2003, and in the Gulf of Alaska in February 2006. They were classified into immature and maturing adults on the basis of gonadal development. The maturing adults commenced spawning migration to coastal areas by the end of summer, because almost all fish in the Bering Sea were immature in September. In the pituitaries of maturing adults, the copy numbers of FSHbeta mRNA and the FSH content were 2.5- to 100-fold those of the immature fish. Similarly, the amounts of LHbeta mRNA and LH content in the maturing adults were 100- to 1000-fold those of immature fish. The plasma levels of testosterone, 11-ketotestosterone and estradiol were higher than 10 nmol l(-1) in maturing adults, but lower than 1.0 nmol l(-1) in immature fish. The increase in the activity of the PG-axis components had already initiated in the maturing adults while they were still in the Gulf of Alaska in winter. In the homing adults, the pituitary contents and the plasma levels of gonadotropins and plasma sex steroid hormones peaked during upstream migration from the coast to the natal hatchery. The present results thus indicate that the seasonal increase in the activity of the PG axis is an important endocrine event that is inseparable from initiation of spawning migration of chum salmon.

    DOI: 10.1242/jeb.021352

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  • Weiwei Hu, Takeshi Onuma, Naoko Birukawa, Masashi Abe, Etsuro Ito, Zhong Chen, Akihisa Urano .  Change of morphology and cytoskeletal protein gene expression during dibutyryl cAMP-induced differentiation in C6 glioma cells. .  Cellular and molecular neurobiology28 ( 4 ) 519 - 28   2008.6Change of morphology and cytoskeletal protein gene expression during dibutyryl cAMP-induced differentiation in C6 glioma cells.Reviewed International coauthorship International journal

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    Elevation of the intracellular cAMP level induces morphological changes of astrocyte-like differentiation in C6 glioma cells. Such changes may be accompanied with expression of cytoskeletal protein genes. We therefore analyzed morphological changes after a treatment with dibutyryl cAMP (dbcAMP) and then assessed the expression of cytoskeletal protein genes by a quantitative real-time polymerase chain reaction. The cell number remained unaltered upon incubation with 1 mM dbcAMP in medium supplemented with 0.1% fetal bovine serum (FBS), whereas the number and lengths of processes increased, when compared with those of cells incubated in medium supplemented with 0.1% or 10% FBS only. The amounts of beta-actin, gamma-actin, and beta-tubulin mRNAs in C6 cells, but not alpha-tubulin mRNA, increased during the early proliferation in DMEM containing 10% FBS. The expression of cytoskeletal protein genes decreased when incubated with 0.1% FBS or 1 mM dbcAMP in 0.1% FBS, compared with those of cells cultured in 10% FBS. These results indicated that, during the early proliferation in normal culture condition, the expression of cytoskeletal protein genes in C6 cells, except alpha-tubulin, increased, while in differentiating or differentiated C6 glioma cells, cAMP-induced morphological changes were not accompanied with elevation of gene expression for cytoskeletal proteins, such as actin and tubulin.

    DOI: 10.1007/s10571-007-9229-y

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  • Shunji Furukuma, Takeshi Onuma, Penny Swanson, Qiong Luo, Nobuhisa Koide, Houji Okada, Akihisa Urano, Hironori Ando .  Stimulatory effects of insulin-like growth factor 1 on expression of gonadotropin subunit genes and release of follicle-stimulating hormone and luteinizing hormone in masu salmon pituitary cells early in gametogenesis. .  Zoological science25 ( 1 ) 88 - 98   2008.1Stimulatory effects of insulin-like growth factor 1 on expression of gonadotropin subunit genes and release of follicle-stimulating hormone and luteinizing hormone in masu salmon pituitary cells early in gametogenesis.Reviewed International coauthorship

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    Insulin-like growth factor-I (IGF-I) has been shown to be involved in pubertal activation of gonadotropin (GTH) secretion. The aim of this study was to determine if IGF-I directly stimulates synthesis and release of GTH at an early stage of gametogenesis. The effects of IGF-I on expression of genes encoding glycoprotein alpha (GPalpha), follicle-stimulating hormone (FSH) beta, and luteinizing hormone (LH) beta subunits and release of FSH and LH were examined using primary pituitary cells of masu salmon at three reproductive stages: early gametogenesis, maturing stage, and spawning. IGF-I alone or IGF-I + salmon GnRH (sGnRH) were added to the primary pituitary cell cultures. Amounts of GPalpha, FSHbeta, and LHbeta mRNAs were determined by real-time PCR. Plasma and medium levels of FSH and LH were determined by RIA. In males, IGF-I increased the amounts of all three subunit mRNAs early in gametogenesis in a dose-dependent manner, but not in the later stages. In females, IGF-I stimulated release of FSH and LH early in gametogenesis, whereas no stimulatory effects on the subunit mRNA levels were observed at any stage. IGF-I + sGnRH stimulated release of FSH and LH at all stages in both sexes, but had different effects on the subunit mRNA levels depending on subunit and stage. The present results suggest that IGF-I itself directly stimulates synthesis and release of GTH early in gametogenesis in masu salmon, possibly acting as a metabolic signal that triggers the onset of puberty.

    DOI: 10.2108/zsj.25.88

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  • Keita Makino, Takeshi A. Onuma, Takashi Kitahashi, Hironori Ando, Masatoshi Ban, Akihisa Urano .  Expression of hormone genes and osmoregulation in homing chum salmon: A minireview .  GENERAL AND COMPARATIVE ENDOCRINOLOGY152 ( 2-3 ) 304 - 309   2007.6Expression of hormone genes and osmoregulation in homing chum salmon: A minireviewInvited Reviewed International journal

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    Pacific salmon migrate from ocean through the natal river for spawning. Information on expression of genes encoding osmoregulatory hormones and migratory behavior is important for understanding of molecular events that underlie osmoregulation of homing salmon. In the present article, regulation of gene expression for osmoregulatory hormones in pre-spawning salmon was briefly reviewed with special reference to neurobypophysial hormone, vasotocin (VT), and pituitary hormones, growth hormone (GH) and prolactin (PRL). Thereafter, we introduced recent data on migratory behavior from SW to FW environment. In pre-spawning chum salmon, the hypothalamic VT mRNA levels increased in the males, while decreased in the females with loss of salinity tolerance when they were kept in SW. The amounts of GH mRNA in the pituitary decreased during ocean migration prior to entrance into FW. Hypo-osmotic stimulation by SW-to-FW transfer did not significantly affect the amount of PRL mRNA, but it was elevated in both SW and FW environments along with progress in final maturation. Behaviorally, homing chum salmon continued vertical movement between SW and FW layers in the mouth of the natal river for about 12 It prior to upstream migration. Pre-spawning chum salmon in an aquarium, which allowed fish free access to SW and FW, showed that individuals with the lower plasma testosterone (T) and higher estradiol-17 beta (E2) levels spent longer time in FW when compared with the SW fish. Taken together, neuroendocrine mechanisms that underlie salt and water homeostasis and migratory behavior from SW to FW may be under the control of the hypothalamus-pituitary-gonadal axis in pre-spawning salmon. (c) 2007 Elsevier Inc. All rights reserved.

    DOI: 10.1016/j.ygcen.2007.01.010

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  • Takeshi A Onuma, Hironori Ando, Nobuhisa Koide, Houji Okada, Akihisa Urano .  Reproductive stage-related effects of salmon GnRH and sex steroid hormones on expression of genes encoding fushi tarazu factor 1 homolog and estrogen receptor alpha in masu salmon pituitary cells in vitro. .  General and comparative endocrinology152 ( 1 ) 64 - 72   2007.5Reproductive stage-related effects of salmon GnRH and sex steroid hormones on expression of genes encoding fushi tarazu factor 1 homolog and estrogen receptor alpha in masu salmon pituitary cells in vitro.Reviewed International journal

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    Expression of genes encoding gonadotropin (GTH) subunits in the salmon pituitary was regulated by salmon gonadotropin-releasing hormone (sGnRH) and sex steroid hormones in a reproductive stage-dependent manner, probably through DNA-binding transcription factors. Direct effects of these hormones on expression of genes encoding salmon fushi tarazu factor 1 homolog (sFF1-I) and estrogen receptor alpha (ERalpha) were therefore examined by use of primary pituitary cell cultures of masu salmon at different reproductive stages. Pituitaries were collected in March (before initiation of gonadal maturation), in May (early maturing), in July (late maturing), and in September (spawning period). Amounts of sFF1-I and ERalpha mRNAs in the pituitary cells were determined by real-time polymerase chain reactions after a treatment with sGnRH, estradiol-17beta (E2), testosterone (T) or 11-ketotestosterone (11KT). The amounts of sFF1-I mRNA were elevated by E2 in the males, and by sGnRH and T in the females before initiation of gonadal maturation and at the early maturing stage. The amounts of ERalpha mRNA in the early maturing females were elevated by sGnRH. Effects of sGnRH were not significant at the late maturing and spawning stages. The amounts of ERalpha mRNA in the spawning males were halved by 11KT and E2, and those of sFF1-I and ERalpha mRNAs in the late maturing females were decreased by T and 11KT. These results indicated that responsiveness of sFF1-I and ERalpha genes to sGnRH and sex steroid hormones is seasonally variable in relation to reproductive stages. Expression of sFF1 and ERalpha genes should be stimulated at the early stages of gonadal maturation prior to increases in the amounts of GTH subunit mRNAs, while attenuated after the late maturing period when stored amounts of GTH subunit mRNAs reached near the maximum.

    DOI: 10.1016/j.ygcen.2007.02.024

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  • Takeshi Onuma, Hironori Ando, Nobuhisa Koide, Houji Okada, Akihisa Urano .  Effects of salmon GnRH and sex steroid hormones on expression of genes encoding growth hormone/prolactin/somatolactin family hormones and a pituitary-specific transcription factor in masu salmon pituitary cells in vitro. .  General and comparative endocrinology143 ( 2 ) 129 - 41   2005.9Effects of salmon GnRH and sex steroid hormones on expression of genes encoding growth hormone/prolactin/somatolactin family hormones and a pituitary-specific transcription factor in masu salmon pituitary cells in vitro.Reviewed International journal

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    Expression of genes encoding growth hormone (GH), prolactin (PRL), and somatolactin (SL) in growing and maturing salmon was stimulated by gonadotropin-releasing hormone (GnRH) analog during particular periods of the life cycle. GnRH therefore appears to directly and/or indirectly regulate gene expression for GH, PRL, and SL in combination with the pituitary-gonadal axis, such as sex steroid hormones. Direct effects of salmon GnRH (sGnRH), estradiol-17beta (E2), testosterone, and 11-ketotestosterone (11KT) on the amounts of GH, PRL, and SL mRNAs were thus examined using primary pituitary cell cultures of masu salmon at the four reproductive stages. We also determined the amounts of mRNA encoding pituitary specific POU homeodomain transcription factor (Pit-1) by real-time polymerase chain reactions. The amounts of GH, PRL, and SL mRNAs in the control cells elevated with gonadal maturation, coincidently with those of Pit-1 mRNA. sGnRH at 1.0 nM elevated the amounts of all mRNAs examined in the pre-spawning females, whereas significant effects were not observed with 100 nM sGnRH at any reproductive stages. Sex steroid hormones had no significant effects before initiation of gonadal maturation and at the maturing stage. In the males, E2 tended to decrease the amounts of SL mRNA in the pre-spawning stage. In the females, E2 and 11KT increased the amounts of PRL and SL mRNAs in the pre-spawning stage, but halved those of PRL mRNA in the spawning stage. The amounts of Pit-1 mRNA changed coincidently with those of PRL and SL mRNAs at all examined stages. The effects of E2 alone were abolished by 100 nM sGnRH. The present results indicated that both sGnRH and steroid hormones directly modulate synthesis of Pit-1, and further expression of PRL and SL genes. sGnRH may indirectly regulate GH/PRL/SL family hormone genes through the pituitary-gonadal axis, particularly in the late stage of gametogenesis.

    DOI: 10.1016/j.ygcen.2005.03.003

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  • Takeshi Onuma, Mikihiko Higa, Hironori Ando, Masatoshi Ban, Akihisa Urano .  Elevation of gene expression for salmon gonadotropin-releasing hormone in discrete brain loci of prespawning chum salmon during upstream migration. .  Journal of neurobiology63 ( 2 ) 126 - 45   2005.5Elevation of gene expression for salmon gonadotropin-releasing hormone in discrete brain loci of prespawning chum salmon during upstream migration.Reviewed International journal

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    Our previous studies suggested that salmon gonadotropin-releasing hormone (sGnRH) neurons regulate both final maturation and migratory behavior in homing salmonids. Activation of sGnRH neurons can occur during upstream migration. We therefore examined expression of genes encoding the precursors of sGnRH, sGnRH-I, and sGnRH-II, in discrete forebrain loci of prespawning chum salmon, Oncorhynchus keta. Fish were captured from 1997 through 1999 along their homing pathway: coastal areas, a midway of the river, 4 km downstream of the natal hatchery, and the hatchery. Amounts of sGnRH mRNAs in fresh frozen sections including the olfactory bulb (OB), terminal nerve (TN), ventral telencephalon (VT), nucleus preopticus parvocellularis anterioris (PPa), and nucleus preopticus magnocellularis (PM) were determined by quantitative real-time polymerase chain reactions. The amounts of sGnRH-II mRNA were higher than those of sGnRH-I mRNA, while they showed similar changes during upstream migration. In the OB and TN, the amounts of sGnRH mRNAs elevated from the coast to the natal hatchery. In the VT and PPa, they elevated along with the progress of final maturation. Such elevation was also observed in the rostroventral, middle, and dorsocaudal parts of the PM. The amounts of gonadotropin IIbeta and somatolactin mRNAs in the pituitary also increased consistently with the elevation of gene expression for sGnRH. These results, in combination with lines of previous evidence, indicate that sGnRH neurons are activated in almost all the forebrain loci during the last phases of spawning migration, resulting in coordination of final gonadal maturation and migratory behavior to the spawning ground.

    DOI: 10.1002/neu.20125

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  • Takeshi Onuma, Yoshitatsu Higashi, Hironori Ando, Masatoshi Ban, Hiroshi Ueda, Akihisa Urano .  Year-to-year differences in plasma levels of steroid hormones in pre-spawning chum salmon. .  General and comparative endocrinology133 ( 2 ) 199 - 215   2003.9Year-to-year differences in plasma levels of steroid hormones in pre-spawning chum salmon.Reviewed International journal

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    Changes in plasma levels of steroid hormones in pre-spawning chum salmon (Oncorhynchus keta) were examined for 6 years in association with sexual maturation. Fish were sampled along their homing pathway from the coastal sea to the spawning ground from 1995 to 2000. Plasma levels of testosterone (T), 11-ketotestosterone (11KT), estradiol-17beta (E2), 17alpha,20beta-dihydroxy-4-pregnen-3-one (DHP), and cortisol were determined by enzyme immunoassays. Sexual maturity was comprehensively estimated by gonadosomatic indices, histology of gonads, nuptial color, spermiation or ovulation ratio. Since the plasma levels of steroid hormones and sexual maturation differed from year to year, they were compared with year-to-year variation of sea surface temperature (SST) of coastal sea to study influence of oceanographic environment on these physiological data. The SST of the migratory route varied among the years, so that we classified the 6 years into cool, intermediate, and warm years. Concerning maturity, the males that returned to the natal hatchery in the warm years were sexually more advanced than those in the cool years. Furthermore, histological data suggested that final oocyte maturation occurred before arrival at the hatchery in one of the warm years, i.e., 1999, while it occurred at the hatchery in one of the intermediate years, i.e., 2000. In the males, T and 11KT levels increased significantly on midway of the homing route in the warm years, whereas they did not show any noticeable changes in the cool years. Furthermore, the levels of T and 11KT on midway of the homing route in the warm years, i.e., 1998 and 1999, were significantly higher than those in one of the cool years, i.e., 1995, in both sexes. In the females, the levels of E2 decreased during upstream migration. Conversely, those of DHP considerably elevated at spawning ground in all years examined. The levels of cortisol were different from year to year regardless of the SST. The present results showed that there were year-to-year differences in plasma levels of steroid hormones and maturity, and some of them may be influenced by the year-to-year variation of SST.

    DOI: 10.1016/S0016-6480(03)00171-0

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  • T Onuma, T Kitahashi, S Taniyama, D Saito, H Ando, A Urano .  Changes in expression of genes encoding gonadotropin subunits and growth hormone/prolactin/somatolactin family hormones during final maturation and freshwater adaptation in prespawning chum salmon .  ENDOCRINE20 ( 1-2 ) 23 - 33   2003.2Changes in expression of genes encoding gonadotropin subunits and growth hormone/prolactin/somatolactin family hormones during final maturation and freshwater adaptation in prespawning chum salmonReviewed

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    The pituitary levels of mRNAs encoding gonadotropin (GTH) subunits (GTH alpha2 and IIbeta), prolactin (PRL), and somatolactin (SL) increased in chum salmon during the last stages of spawning migration. In the-present study, changes in pituitary levels of mRNAs encoding GTH alpha2, Ibeta, and IIbeta; growth hormone (GH); PRL; and SL were examined in homing chum salmon of Sanriku stock to clarify whether the changes are associated with final maturation or freshwater (FW) adaptation. In 1993, fish were caught at four areas: off the coast of Sanriku (off-coast), the mouth of Otsuchi Bay (ocean), inside of Otsuchi Bay (bay), and the Otsuchi River (river). In addition, effects of hypoosmotic stimulation by transition from seawater (SW) to FW were examined in 1994 and 1995. The amounts of mRNAs were determined by dot-blot analyses or real-time polymerase chain reactions. The levels of GTH alpha2 and IIbeta mRNAs in the ocean, bay, and river fish were two to five times those in the off-coast fish, and the levels of SL mRNAs in the bay fish were two to four times those in the off-coast fish. The levels of GH and PRL mRNAs in the ocean and bay fish were significantly lower than those in the off-coast fish, and those in the river fish were three to five times those in the ocean and bay fish. In the SW-to-FW transition experiment in 1994, the levels of GTH alpha2, Ibeta, and lip mRNAs transiently increased, whereas changes were insignificant in 1995. The levels of GH, PRL, and SL mRNAs increased in both SW and FW environments, and no apparent effects of SW-to-FW transition were observed. The present study suggests that in prespawning chum salmon, expression of genes encoding GTH alpha2, IIbeta, and SL elevates with final maturation regardless of osmotic environment. Hypoosmotic stimulation by transition from the SW-to-FW environment is not critical to modulate expression of genes for PRL. PRL gene expression can be elevated in SW fish that were sexually almost matured.

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  • IGF-I STIMULATES SYNTHESIS AND RELEASE OF GTH IN MASU SALMON PITUITARY CELLS AT EARLY STAGES OF GAMETOGENESIS Reviewed

    FURUKUMA Shunji, ONUMA Takeshi, URANO Akihisa, ANDO Hironori

    ( 21 )   54 - 54   2006.11

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)  

    CiNii Books

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  • CHANGES IN PLASMA LEVELS OF STEROID HORMONES DURING SPAWNING MIGRATION IN CHUMA SALMON (ONCORHYNCHUS KETA) Reviewed International journal

    ONUMA Takeshi, ANDO Hironori, BAN Masatoshi, FUKUWAKA Masa-aki, UEDA Hiroshi, URANO Akihisa

    ( 17 )   19 - 19   2002.12

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  • CHANGES IN EXPRESSION OF GENES ENCODING GTH SUBUNITS AND GH/PRL/SL FAMILY DURING FINAL MATURATION AND FRESHWATER ADAPTATION IN PRE-SPAWNING CHUM SALMON (ONCORHYNCHUS KETA) Invited Reviewed International journal

    ONUMA Takeshi, TANIYAMA Shinya, KITAHASHI Takashi, ANDO Hironori, URANO Akihisa

    Prog. Jpn. Soc. Comp. Endocrinol.   16   73 - 73   2001.12

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  • 体の左右はどのようにできるのか?-オタマボヤの左右非対称性を探る.

    小沼健

    academist Journal.   2020.5

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  • 二本鎖DNAによる新規の遺伝子ノックダウン現象を駆動する核酸-酵素複合体の解明

    小沼 健

    日本応用酵素協会誌   ( 54 )   33 - 34   2020.3

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  • 母性因子の大規模な機能的スクリーニングを可能にする新しい脊索動物

    小沼 健, 松尾 正樹

    Medical Science Digest   45 ( 7 )   422 - 423   2019.6

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    卵形成の過程でmRNAやタンパク質として卵細胞に蓄えられる母性因子は、卵成熟や初期発生において重要な役割をになう。母性因子をコードする遺伝子はゲノム上の過半数を占めており、未知の因子が残されていると期待される。本稿では、脊索動物のオタマボヤをもちいた、母性因子の大規模な機能的スクリーニングを紹介する。この実験系は、安価に多数の母性因子を機能阻害できることや、卵形成や胚発生の表現型異常を調べやすいことなど、哺乳類における母性因子の研究を補いうる特長を備えている。(著者抄録)

  • 母性因子の大規模な機能的スクリーニングを可能にする新しい脊索動物

    小沼 健, 松尾 正樹

    Medical Science Digest   45 ( 7 )   422 - 423   2019.6

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    Language:Japanese   Publisher:(株)ニュー・サイエンス社  

    卵形成の過程でmRNAやタンパク質として卵細胞に蓄えられる母性因子は、卵成熟や初期発生において重要な役割をになう。母性因子をコードする遺伝子はゲノム上の過半数を占めており、未知の因子が残されていると期待される。本稿では、脊索動物のオタマボヤをもちいた、母性因子の大規模な機能的スクリーニングを紹介する。この実験系は、安価に多数の母性因子を機能阻害できることや、卵形成や胚発生の表現型異常を調べやすいことなど、哺乳類における母性因子の研究を補いうる特長を備えている。(著者抄録)

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  • オタマボヤ綱ミトコンドリアゲノムの進化

    横堀伸一, 笠原享祐, 大塚玄航, 大塚玄航, 西野敦雄, 小沼健, 西田宏紀, 山岸明彦

    日本進化学会大会プログラム・講演要旨集(Web)   20th   107 (WEB ONLY)   2018.8

  • 二本鎖DNAによる新規の遺伝子ノックダウン現象(DNAi) ガイド鎖と核酸分解酵素Argonauteからそのしくみに迫る

    小沼 健, 塚田 かすみ, 西田 宏記

    日本応用酵素協会誌   ( 52 )   11 - 18   2018.3

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    DNAiは二本鎖DNAを注入した細胞において、配列特異的に遺伝子機能が阻害される現象である。海産プランクトンであるオタマボヤでのDNAi発見例を紹介し、その特徴、RNAiとの類似性、DNAiにおけるガイド鎖合成、Argonauteの多様性について述べた。特にRNAiでみられる標的mRNAの分解反応との比較に焦点を当て、最近の知見を概説した。

  • 二本鎖DNAによる新規の遺伝子ノックダウン現象(DNAi) ガイド鎖と核酸分解酵素Argonauteからそのしくみに迫る Invited

    小沼 健, 塚田 かすみ, 西田 宏記

    日本応用酵素協会誌   ( 52 )   11 - 18   2018.3

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    Language:Japanese   Publisher:(公財)日本応用酵素協会  

    DNAiは二本鎖DNAを注入した細胞において、配列特異的に遺伝子機能が阻害される現象である。海産プランクトンであるオタマボヤでのDNAi発見例を紹介し、その特徴、RNAiとの類似性、DNAiにおけるガイド鎖合成、Argonauteの多様性について述べた。特にRNAiでみられる標的mRNAの分解反応との比較に焦点を当て、最近の知見を概説した。

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  • 尾索動物オタマボヤ綱ミトコンドリアゲノムの進化

    横堀伸一, 笠原享祐, 大塚玄航, 大塚玄航, 西野敦雄, 小沼健, 西田宏紀, 山岸明彦

    日本進化学会大会プログラム・講演要旨集(Web)   19th   86 (WEB ONLY)   2017.8

  • Three stages of learning mastery : the fundamentals, breaking with tradition, and parting with traditional

    69 ( 4 )   30 - 32   2017

  • 脊索動物ワカレオタマボヤを用いたDNAiによる<br>母性因子の機能的スクリーニング

    松尾 正樹, 表迫 竜也, 小沼 健, 西田 宏記

    比較内分泌学   43 ( 162 )   136 - 137   2017

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    Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.43.136

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  • 脊索動物ワカレオタマボヤにおける2つの遺伝子サイレンシング機構::RNA interferenceとDNA interference Invited Reviewed

    表迫 竜也, 西田 宏記, 小沼 健

    比較内分泌学   42 ( 157 )   5 - 6   2016

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.42.5

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  • ワカレオタマボヤ

    岸 香苗, 西田 宏記, 小沼 健

    比較内分泌学   42 ( 157 )   2 - 4   2016

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.42.2

    CiNii Books

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  • Duplicated Kiss1 receptor genes in zebrafish : Distinct gene expression patterns, different ligand selectivity, and a novel nuclear isoform with transactivating activity

    Comparative Endocrinology   39 ( 148 )   48 - 51   2013

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:Japan Society for Comparative Endocrinology  

    DOI: 10.5983/nl2008jsce.39.48

    CiNii Books

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  • IGFシグナルはゼブラフィッシュ初期胚におけるGnRHニューロンの局在に必須である

    小沼 健

    比較内分泌学   37 ( 143 )   226 - 228   2011

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.37.226

    CiNii Books

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  • シロザケの産卵回遊の開始および淡水適応に先立つ成長ホルモン/プロラクチン/ソマトラクチンファミリー遺伝子の発現変動

    小沼 健

    比較内分泌学 = Comparative endocrinology   36 ( 138 )   211 - 214   2010.8

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.36.211

    CiNii Books

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  • GnRHに対する反応性の分子制御とサケの産卵回遊

    安東 宏徳, 小沼 健, 浦野 明央

    比較内分泌学 = Comparative endocrinology   35 ( 132 )   7 - 23   2009.2

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:日本比較内分泌学会  

    DOI: 10.5983/nl2008jsce.35.7

    CiNii Books

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  • Changes in expression of growth hormone/prolactin/somatolactin family hormone genes in the pituitary of chum salmon during spawning migration

    Takeshi A. Onuma, Masatoshi Ban, Aya Jodo, Hironori Ando, Masa-aki Fukuwaka, Tomonori Azumaya, Akihisa Urano

    ZOOLOGICAL SCIENCE   23 ( 12 )   1195 - 1195   2006.12

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    Publisher:ZOOLOGICAL SOC JAPAN  

    Web of Science

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  • 産卵回遊の分子内分泌学的基盤 (特集 サケの生理学)

    小沼 健, 安東 宏徳, 浦野 明央

    海洋と生物   28 ( 1 )   31 - 41   2006.2

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    Publisher:生物研究社  

    CiNii Books

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  • Increases in plasma levels of sex steroid hormones along with the onset of spawning migration in chum salmon

    Takeshi Onuma, Shunpei Sato, Aya Judo, Nancy Davis, Hironori Ando, Masatoshi Ban, Masa-aki Fukuwaka, Akihisa Urano

    ZOOLOGICAL SCIENCE   21 ( 12 )   1337 - 1337   2004.12

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    Web of Science

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Awards

  • 2020 日本動物学会奨励賞

    2020.9   脊索動物オタマボヤを活かした発生学の展開

    小沼健

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  • The 3rd Annual Meeting of Whole-Organism Science Society Joint meeting with The 12th Annual Meeting of Structural-Biological Whole Cell Project 優秀発表賞

    2013.9  

    Onuma TA, Kishi K, Omotezako T, Nishida H

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  • The Endocrine Society Outstanding Abstract Award

    2010.6   Endo 2010: The 92th Annual Society and Expo  

    Onuma TA

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  • Zoological Science Award 2009

    2009.6   Stimulatory effects of insulin-like growth factor 1 on expression of gonadotropin subunit genes and release of follicle-stimulating hormone and luteinizing hormone in masu salmon pituitary cells at early gametogenesis.

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  • 第31回日本比較内分泌学会 最優秀発表賞 (共著者)

    2006.11  

    古熊俊治, 小沼健, 浦野明央, 安東宏徳

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  • The Jimmie Dodd Memorial Prize

    2005.5  

    Onuma TA

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Research Projects

  • オタマボヤから学ぶ、繊維をもちいた折りたたみ式ハウスの設計工法

    2022.11 - 2023.10

    2022年度「自然に学ぶものづくり」研究助成 

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\1600000

  • House construction with animal fibers in the chordate, Oikopleura dioica..

    Grant number:20H05946  2020.11 - 2025.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Transformative Research Areas (A)  Grant-in-Aid for Transformative Research Areas (A)

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    Grant amount:\60970000 ( Direct Cost: \46900000 、 Indirect Cost:\14070000 )

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  • 形態形成の原理の解明と工学への展開

    Grant number:20H05941  2020.11 - 2025.3

    日本学術振興会  科学研究費助成事業 学術変革領域研究(A)  学術変革領域研究(A)

    井上 康博, 船山 典子, 近藤 滋, 新美 輝幸, 大澤 志津江, 小沼 健, 秋山 正和, 山崎 慎太郎

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    Grant amount:\285480000 ( Direct Cost: \219600000 、 Indirect Cost:\65880000 )

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  • 動植軸と左右軸の決定機構を単純な脊索動物を使って理解する

    Grant number:18K06256  2018.4 - 2021.3

    日本学術振興会  科学研究費助成事業 基盤研究(C)  基盤研究(C)

    小沼 健

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    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

    胚発生における重要なイベントに、3つの胚軸 (動植軸、それに直行する軸、左右軸)の決定がある。本研究では、脊索動物であるオタマボヤの特徴を活用して、(1)動植軸と (2) 左右軸ができるしくみの解析を進めている。本年度の成果を概説する。
    (1) 動植軸が決定するしくみ
    動物半球と植物半球においてsingle cell RNA-seqを行いリストアップした母性mRNAを調べて、8細胞胚の植物半球後方に局在するmRNAを5つ見出している。おもしろいことに、そのうちの一つは、未受精卵の段階から植物半球側に局在していることが分かった。これを手がかりに、動植軸ができるのかを調べる準備を進めた。具体的には、卵巣のパラフィン切片をつくりin situ hybridizationを行う条件を整えた。
    (2) 2細胞期を起点とする左右非対称形成
    オタマボヤの左右非対称形成は、ホヤや脊椎動物で知られるものとは異なる。たとえば1世紀前から、初期胚発生 (2-4細胞期)から左右非対称性がみられることが報告されている。また幼生の神経索が、背側ではなく左側に存在している。このユニークな左右性の実体を調べ、「左側決定因子であるNodalがゲノムにないこと」「Bmp遺伝子がCa2+オシレーションに依存して「右側に」発現すること」「Bmpの発現細胞は胚の右側からつくられること」また「Bmpシグナルが右側で神経マーカーの遺伝子発現を抑えること」などを明らかにした。本年度はこれらをまとめて、学会・論文発表を行った。
    脊椎動物の胚では、Bmpは「腹側化因子」として働き、神経形成を抑制することで背腹軸の形成にかかわる。他方、オタマボヤの場合は、このBmpによる背腹形成の経路が「約90度回転して働く」ことで、左右性の形成に転用される (いわゆるco-optionの一例とみなせる)という仮説を提唱した。

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  • オタマボヤ幼生の開口による3D形成と分泌による摂餌フィルターの3D構築

    Grant number:18H04763  2018.4 - 2020.3

    日本学術振興会  科学研究費助成事業 新学術領域研究(研究領域提案型)  新学術領域研究(研究領域提案型)

    小沼 健

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    Grant amount:\11440000 ( Direct Cost: \8800000 、 Indirect Cost:\2640000 )

    本研究では、脊索動物ワカレオタマボヤ (以下、オタマボヤ) の特長を活かした3D形態形成の解明を進める。具体的には、(1) 内胚葉と外胚葉の上皮がつながり「くち」ができるしくみ、(2) 表皮細胞から、3D構造をもった接餌フィルター(ハウス)が分泌される原理、の2つの解明を進めている。
    (1)「くち」の3D形成
    オタマボヤの口は、数十個と少数の細胞でできている。また幼生の孵化から7時間以内に出来上がるため、イメージングに有利である。開口する過程を観察したところ、他の動物の例と異なり、外胚葉の貫入ではなく、内胚葉細胞 (oral plugと命名)が外部に露出することが分かった。さらに核やアクチン(細胞膜とほぼ同義)のライブイメージングを行ったところ、体幹部の前端に「背腹方向に分裂する表皮細胞(lip precursor cellsと命名)」が2つあり、それらの娘細胞がそれぞれ上唇、下唇になるという現象を見出した。
    (2)ハウスの3D形成
    オタマボヤは表皮細胞から分泌するハウスというフィルター構造の中に棲む。体幹部は、折り畳んだ状態のハウス (ハウス原基)を常に2-3枚まとっており、外側の1枚を膨らまして使用するのである。本年度は、ハウスやハウス原基の構造を把握することを試みた。ハウスはセルロースを含むことが知られている。そこでセルロースの蛍光染色を行ったところ、海水の入り口 (inlet filter)に縦糸・横糸でできた格子状の網目を見いだした。この格子構造は、ハウス原基にも存在していた。さらに走査型電子顕微鏡 (SEM)で観察したところ、これらの糸は、直径数十ナノメートルの繊維が組み合わさってできていることを見出した。またハウスの他の領域も、微細な繊維が編み込まれてできていることが分かってきた。これらの結果は、ハウスが「繊維状の素材」を構成単位としてできていることを示すものである。

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  • 二本鎖DNAによる新規の遺伝子ノックダウン現象を駆動する核酸-酵素複合体の解明

    2018.3 - 2019.3

    日本応用酵素協会 2018年度 酵素研究助成 

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  • 二本鎖DNAにより駆動される新規の遺伝子ノックダウン現象の動作原理の解明

    2016.10 - 2017.9

    住友財団 2016年度 基礎科学研究助成 

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    Authorship:Principal investigator 

  • 二本鎖DNAによる新規の遺伝子ノックダウン現象の実行因子の解明と生体内での再構築

    2016.10 - 2017.9

    カシオ科学技術振興財団 第34回 研究助成 

  • Developmental biology of the appendicularian, Oikopleura dioica: Tool development and study of developmental phenomena.

    Grant number:26840079  2014.4 - 2016.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B)  Grant-in-Aid for Young Scientists (B)

    Onuma Takeshi

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    Grant amount:\4160000 ( Direct Cost: \3200000 、 Indirect Cost:\960000 )

    The apppendicularian, Oikopleura dioica, is a planktonic tunicate with a chordate body plan. It is proposed as a simplest model chromate because of its transparency, small cell number, simple body organization, and rapid development. This study aimed to develop genetic approaches and study developmental phenomena of O. dioica. Several major progresses are made during the 2 years for research period: (1) RNA-seq and de novo assemble of mRNAs in eggs and larvae were carried out; (2) A new gene knockdown phenomena induced by double-stranded DNA was found and reported as DNAi; (3) A morphological atlas of adults based on scanning electron microscopic observation was generated; (4) Trunk epidermis patterning and assynmetries of cell lineage of adult body were described with the aid of live imaging techniques; (5) A easy-to-use protocol to detect mRNAs in embryos was developed; and (6) Genome and developmental transcriptome databases are under constructions.

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  • Developing methodologies for developmental genetics of an appendicularian, Oikopleura dioica.

    Grant number:24870019  2012.8 - 2014.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Research Activity Start-up  Grant-in-Aid for Research Activity Start-up

    ONUMA Takeshi

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    Grant amount:\2990000 ( Direct Cost: \2300000 、 Indirect Cost:\690000 )

    A planktonic tunicate, Oikopleura dioica, is a candidate model organism to understand mechanisms of chordate development. It has the short life cycle of only five days and consists of small number of cells. In this study, I aimed to establish molecular and genetic approaches using this simple chordate. First, I tried transposon-mediated transgenesis of O. dioica. My analyses identified three transposons of which exogenous transposase mRNAs are translated to proteins and localize to the nucleus of early embryos. Second, I cloned several cDNAs from Japanese O. dioica. They include testis-specific histones and homologues of proteins that regulate cell polarizing and axis formation in other model organisms. Furthermore, to characterize all mRNA transcripts in unfertilized eggs and larvae, RNA seq analysis was performed. Third, inbreeding over 10 generations was carried out to establish inbred line.

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  • 神経ホルモンによるサケの産卵回遊およびマウスの春期発動制御の比較分子内分泌学

    Grant number:06J09320  2006 - 2008

    日本学術振興会  科学研究費助成事業 特別研究員奨励費  特別研究員奨励費

    小沼 健

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    Grant amount:\3400000 ( Direct Cost: \3400000 )

    平成20年度は,成長因子IGF-Iと脳内GnRH系の相互作用に着目し,IGF研究の第一人者であるCunming Duan教授の研究室でゼブラフィッシュを用いた研究を進めた.また,これまでにシロザケで得た研究成果を順次公開した.
    1.ゼブラフィッシュでは受精後約24時間でGnRHの発現細胞が出現する.IGF-Iの役割を調べるため,細胞内シグナルドメインを欠損したIGF-I受容体を強制発現させIGF-Iシグナルを阻害したところ,GnRHの発現細胞の出現が6時間以上遅延することが分かった.現在は,GnRHニューロンが視床下部へと移動する時期のIGF-Iの役割を調べている.
    2.GnRH分泌の制御因子KiSSの受容体GPR54に注目し,ゼブラフィッシュとマウスの脳からcDNAクローニングを行なった.ゼブラフィッシュから6種類,マウスから2種類のバリアントを単離した.これらは選択的スプライシングにより産生され,膜貫通ドメインの一部を欠損したGPR54をコードすると考えられる.現在,培養細胞を用いた機能解析を進めている.
    3.シロザケがベーリング海から産卵回遊を開始するのに先立ち,下垂体-生殖腺系(PG系)の活動が高まること(J.Exp.Biol誌),またIGF-Iの血中量が高まること(Ann.NY.Acad.Sci.誌)を報告した.
    2月のアラスカ湾のシロザケでは,6-7月のベーリング海の個体より,前脳のほぼ全ての部域でGnRH mRNA量が高かった.すなわち,ベーリング海から産卵回遊を開始する数ヶ月前にGnRHの遺伝子発現が高まることを示した(北米神経科学学会で発表,投稿準備中).
    さらに成長・摂食および生殖に関わるホルモン,グレリンの遺伝子発現を調べた.シロザケでは母川の遡上時にGnRH遺伝子の発現量が高まるが,対応して脳内でグレリンのmRNA量が変動することが分かった(未発表,投稿準備中).

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  • 産卵回遊時のシロザケ脳内における神経ホルモン遺伝子の発現変動とその調節機構

    Grant number:04J09104  2004 - 2005

    日本学術振興会  科学研究費助成事業 特別研究員奨励費  特別研究員奨励費

    小沼 健

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    Grant amount:\1900000 ( Direct Cost: \1900000 )

    サケの産卵回遊の時間軸により規定される「ホルモンの遺伝子発現プログラム」を明らかにするため,母川回帰にともなう脳内のsGnRH遺伝子および下垂体中の下垂体ホルモン遺伝子の発現変動を解析した.さらに,下垂体細胞の初代培養系を用いて,sGnRHおよび性ステロイドホルモンの効果を調べた.今年度はこれらの結果を原著論文2報、総説1報として公表した.なお,本研究の成果の一部を発表した国際比較内分泌会議では,最優秀ポスター賞を受賞した.内容を以下に示す.
    1)1997-1999年にわたり,石狩川を遡上するシロザケの脳内各領域に含まれるsGnRH-I,-II mRNA量を測定したところ,遡上にともない脳内全域でsGnRHの遺伝子発現が高まることが分かった(Journal of Neurobiology誌に掲載).
    2)2001-2003年にかけて,6-7月および9月にベーリング海のシロザケから採取した下垂体,血液を解析した.その結果母川へと回帰する成熟個体では,下垂体中の生殖腺刺激ホルモン(GTH)サブユニット遺伝子の発現量,血中の性ステロイドホルモン量ともに,未成熟個体の10-100倍にまで高まることが分かった(国際比較内分泌学会で最優秀ポスター賞(Jimmie Dodd Memorial Prize)を受賞).
    3)サクラマスの下垂体細胞を用いて,sGnRHおよび性ステロイドホルモンが下垂体ホルモンの遺伝子発現に及ぼす効果を調べたところ,性成熟の後期には,性ステロイドホルモンがプロラクチン,ソマトラクチン,および転写調節因子Pit-1の遺伝子発現を変化させることが分かった(General and Comparative Endocrinology誌に掲載).さらに同じ細胞を用いて,転写調節因子FF1およびERaの遺伝子発現を調べ,GTH遺伝子の発現調節機構についても知見を得た(投稿準備中).

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  • Mechanisms of embryonic (animal-vegetal and left-right) axes determination during oogenesis and embryogenesis

    Grant number:19H03234  2019.4 - 2023.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\17160000 ( Direct Cost: \13200000 、 Indirect Cost:\3960000 )

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  • Self-organization of elaborate digestive tract in the simple chordate

    Grant number:17KT0023  2017.7 - 2021.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

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    Grant amount:\18590000 ( Direct Cost: \14300000 、 Indirect Cost:\4290000 )

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  • Generation of complex and elaborate patterns with invariant cell lineages during trunk oikoplastic epidermis development of appendicularians

    Grant number:16K14735  2016.4 - 2018.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Challenging Exploratory Research  Grant-in-Aid for Challenging Exploratory Research

    Nishida Hiroki

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    Grant amount:\3770000 ( Direct Cost: \2900000 、 Indirect Cost:\870000 )

    Mechanisms for morphogenetic processes that generate complex patterns in a reproducible manner remain elusive. The trunk epidermis of appendicularians, called the oikoplastic epithelium (OE), has elaborate cellular arrangements showing a complex pattern. The OE is characterized by invariant number, size, and shape of the monolayer epithelial cells. First, we subdivided the OE and defined several domains by cellular resolution, and systematically gave names to the constituent cells. Time-lapse imaging of the epidermal cells revealed region-specific pattern formation processes. Regulation of orientation, timing, and the number of rounds of cell divisions, but not cell death and migration, was a critical mechanism for determination of final cell arrangement and size. These detailed descriptions of OE patterning processes provide basic and essential information in the generation of elaborate and intricate but stereotyped cellular patterns.

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  • Mechanisms that specify the animal-vegetal axis in early animal embryos

    Grant number:15H04377  2015.4 - 2019.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    Nishida Hiroki

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    Grant amount:\15990000 ( Direct Cost: \12300000 、 Indirect Cost:\3690000 )

    The animal-vegetal (A-V) axis is already set in unfertilized eggs. It plays crucial roles to coordinate germ-layer formation. However, how the A-V axis is set has not been well studied. In this study, we investigated mechanisms of how A-V axis is set in ascidians and larvaceans. Especially we show that, in ascidians, when the germinal vesicle of full-grown oocytes were experimentally translocated to the opposite pole by centrifugal force, every aspect that designates A-V polarity was reversed in the eggs and embryos. This is the first report in which the A-V axis was experimentally and completely reversed in animal oocytes before fertilization.

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  • Development of forward gentics methods in appendicularians as a novel chordate model organism

    Grant number:26650079  2014.4 - 2016.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Challenging Exploratory Research  Grant-in-Aid for Challenging Exploratory Research

    Nishida Hiroki, ONUMA Takeshi

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    Grant amount:\3900000 ( Direct Cost: \3000000 、 Indirect Cost:\900000 )

    The appendicularian, Oikopleura dioica is a planktonic chordate, which share basic bodyplan with vertebrates. The life cycle is just 5 days. In this project, we aimed to make O. dioica an emerging model animal with which genetic approaches are feasible, such as in nematode and fly. In the processes of this project, we found that novel DNAi method works in this animal. Gene knockdown using DNAi will facilitate to screen and find developmentally important genes with ease and less expensive way.

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